Cadmium in PDB 1aw6: GAL4 (Cd), uc(Nmr), 24 Structures
Cadmium Binding Sites:
The binding sites of Cadmium atom in the GAL4 (Cd), uc(Nmr), 24 Structures
(pdb code 1aw6). This binding sites where shown within
5.0 Angstroms radius around Cadmium atom.
In total 2 binding sites of Cadmium where determined in the
GAL4 (Cd), uc(Nmr), 24 Structures, PDB code: 1aw6:
Jump to Cadmium binding site number:
1;
2;
Cadmium binding site 1 out
of 2 in 1aw6
Go back to
Cadmium Binding Sites List in 1aw6
Cadmium binding site 1 out
of 2 in the GAL4 (Cd), uc(Nmr), 24 Structures
Mono view
Stereo pair view
|
A full contact list of Cadmium with other atoms in the Cd binding
site number 1 of GAL4 (Cd), uc(Nmr), 24 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cd44
b:0.0
occ:1.00
|
SG
|
A:CYS11
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS21
|
2.5
|
0.0
|
1.0
|
SG
|
A:CYS28
|
2.6
|
0.0
|
1.0
|
SG
|
A:CYS14
|
2.6
|
0.0
|
1.0
|
HB2
|
A:CYS21
|
3.0
|
0.0
|
1.0
|
HB3
|
A:CYS28
|
3.1
|
0.0
|
1.0
|
CD
|
A:CD45
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS21
|
3.2
|
0.0
|
1.0
|
HA
|
A:CYS21
|
3.3
|
0.0
|
1.0
|
H
|
A:CYS11
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS28
|
3.4
|
0.0
|
1.0
|
HB2
|
A:CYS14
|
3.5
|
0.0
|
1.0
|
CB
|
A:CYS14
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS11
|
3.8
|
0.0
|
1.0
|
CB
|
A:CYS11
|
3.8
|
0.0
|
1.0
|
HB2
|
A:CYS28
|
3.8
|
0.0
|
1.0
|
CA
|
A:CYS21
|
3.8
|
0.0
|
1.0
|
HB2
|
A:LYS30
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS11
|
4.2
|
0.0
|
1.0
|
HB3
|
A:CYS21
|
4.2
|
0.0
|
1.0
|
H
|
A:CYS14
|
4.2
|
0.0
|
1.0
|
HB3
|
A:LYS30
|
4.3
|
0.0
|
1.0
|
H
|
A:CYS28
|
4.4
|
0.0
|
1.0
|
HB3
|
A:CYS14
|
4.4
|
0.0
|
1.0
|
O
|
A:LYS20
|
4.5
|
0.0
|
1.0
|
H
|
A:LYS23
|
4.6
|
0.0
|
1.0
|
HB2
|
A:CYS11
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS11
|
4.6
|
0.0
|
1.0
|
CB
|
A:LYS30
|
4.6
|
0.0
|
1.0
|
N
|
A:CYS14
|
4.7
|
0.0
|
1.0
|
HG2
|
A:LYS30
|
4.7
|
0.0
|
1.0
|
SG
|
A:CYS38
|
4.7
|
0.0
|
1.0
|
CA
|
A:CYS14
|
4.8
|
0.0
|
1.0
|
N
|
A:CYS21
|
4.8
|
0.0
|
1.0
|
HB
|
A:ILE13
|
4.8
|
0.0
|
1.0
|
C
|
A:CYS21
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS28
|
4.8
|
0.0
|
1.0
|
HA
|
A:ALA10
|
4.8
|
0.0
|
1.0
|
HG21
|
A:ILE13
|
4.9
|
0.0
|
1.0
|
HA
|
A:LYS23
|
4.9
|
0.0
|
1.0
|
C
|
A:LYS20
|
5.0
|
0.0
|
1.0
|
|
Cadmium binding site 2 out
of 2 in 1aw6
Go back to
Cadmium Binding Sites List in 1aw6
Cadmium binding site 2 out
of 2 in the GAL4 (Cd), uc(Nmr), 24 Structures
Mono view
Stereo pair view
|
A full contact list of Cadmium with other atoms in the Cd binding
site number 2 of GAL4 (Cd), uc(Nmr), 24 Structures within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Cd45
b:0.0
occ:1.00
|
SG
|
A:CYS28
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS38
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS11
|
2.4
|
0.0
|
1.0
|
SG
|
A:CYS31
|
2.4
|
0.0
|
1.0
|
H
|
A:CYS28
|
2.9
|
0.0
|
1.0
|
HB2
|
A:CYS38
|
3.0
|
0.0
|
1.0
|
HB
|
A:ILE13
|
3.1
|
0.0
|
1.0
|
CD
|
A:CD44
|
3.1
|
0.0
|
1.0
|
CB
|
A:CYS38
|
3.2
|
0.0
|
1.0
|
HB2
|
A:CYS11
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS11
|
3.3
|
0.0
|
1.0
|
HA
|
A:CYS38
|
3.4
|
0.0
|
1.0
|
HB3
|
A:CYS11
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS31
|
3.5
|
0.0
|
1.0
|
HB2
|
A:CYS31
|
3.5
|
0.0
|
1.0
|
HB3
|
A:LYS30
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS31
|
3.7
|
0.0
|
1.0
|
CA
|
A:CYS38
|
3.9
|
0.0
|
1.0
|
N
|
A:CYS28
|
3.9
|
0.0
|
1.0
|
CB
|
A:CYS28
|
3.9
|
0.0
|
1.0
|
HA
|
A:LYS27
|
4.0
|
0.0
|
1.0
|
HG23
|
A:ILE13
|
4.0
|
0.0
|
1.0
|
CB
|
A:ILE13
|
4.1
|
0.0
|
1.0
|
HB3
|
A:CYS28
|
4.2
|
0.0
|
1.0
|
HB3
|
A:CYS38
|
4.2
|
0.0
|
1.0
|
H
|
A:ILE13
|
4.3
|
0.0
|
1.0
|
N
|
A:CYS31
|
4.3
|
0.0
|
1.0
|
HB3
|
A:LYS27
|
4.3
|
0.0
|
1.0
|
HB3
|
A:CYS31
|
4.4
|
0.0
|
1.0
|
CG2
|
A:ILE13
|
4.4
|
0.0
|
1.0
|
HG21
|
A:ILE13
|
4.5
|
0.0
|
1.0
|
HE1
|
A:TYR40
|
4.5
|
0.0
|
1.0
|
HB2
|
A:LYS30
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS28
|
4.5
|
0.0
|
1.0
|
HD1
|
A:TYR40
|
4.5
|
0.0
|
1.0
|
H
|
A:CYS14
|
4.6
|
0.0
|
1.0
|
CB
|
A:LYS30
|
4.6
|
0.0
|
1.0
|
CA
|
A:CYS31
|
4.6
|
0.0
|
1.0
|
HB2
|
A:CYS28
|
4.7
|
0.0
|
1.0
|
HE3
|
A:TRP36
|
4.8
|
0.0
|
1.0
|
HG12
|
A:ILE13
|
4.8
|
0.0
|
1.0
|
N
|
A:CYS38
|
4.8
|
0.0
|
1.0
|
CA
|
A:CYS11
|
4.8
|
0.0
|
1.0
|
CA
|
A:LYS27
|
4.8
|
0.0
|
1.0
|
C
|
A:LYS27
|
4.8
|
0.0
|
1.0
|
H
|
A:CYS38
|
4.8
|
0.0
|
1.0
|
SG
|
A:CYS14
|
4.8
|
0.0
|
1.0
|
HG13
|
A:ILE13
|
4.8
|
0.0
|
1.0
|
H
|
A:CYS11
|
4.9
|
0.0
|
1.0
|
CG1
|
A:ILE13
|
4.9
|
0.0
|
1.0
|
C
|
A:CYS38
|
4.9
|
0.0
|
1.0
|
N
|
A:ILE13
|
5.0
|
0.0
|
1.0
|
|
Reference:
J.D.Baleja,
V.Thanabal,
G.Wagner.
Refined Solution Structure of the Dna-Binding Domain of GAL4 and Use of 3J(113CD,1H) in Structure Determination. J.Biomol.uc(Nmr) V. 10 397 1997.
ISSN: ISSN 0925-2738
PubMed: 9460244
DOI: 10.1023/A:1018332327565
Page generated: Fri Jul 19 13:04:14 2024
|