Cadmium in PDB 1dat: Cubic Crystal Structure Recombinant Horse L Apoferritin

The structure of Cubic Crystal Structure Recombinant Horse L Apoferritin, PDB code: 1dat was solved by B.Gallois, T.Granier, B.Langlois D'estaintot, R.R.Crichton, F.Roland, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 2.05
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	183.700, 183.700, 183.700, 90.00, 90.00, 90.00
R / Rfree (%)	17.8 / n/a

The binding sites of Cadmium atom in the Cubic Crystal Structure Recombinant Horse L Apoferritin (pdb code 1dat). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 3 binding sites of Cadmium where determined in the Cubic Crystal Structure Recombinant Horse L Apoferritin, PDB code: 1dat:
Jump to Cadmium binding site number: 1; 2; 3;

Cadmium binding site 1 out of 3 in the Cubic Crystal Structure Recombinant Horse L Apoferritin


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Cubic Crystal Structure Recombinant Horse L Apoferritin within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd201 b:48.5 occ:0.33 OE1 A:GLU130 2.5 32.5 1.0 CD A:GLU130 3.4 26.0 1.0 OE2 A:GLU130 3.6 21.4 1.0 CD A:CD202 4.4 9.3 0.3 CG A:GLU130 4.8 24.3 1.0 O A:HOH271 4.9 20.0 1.0

Cadmium binding site 2 out of 3 in the Cubic Crystal Structure Recombinant Horse L Apoferritin


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Cubic Crystal Structure Recombinant Horse L Apoferritin within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd202 b:9.3 occ:0.33 OD1 A:ASP127 3.4 34.0 1.0 CD A:CD201 4.4 48.5 0.3 OE1 A:GLU130 4.4 32.5 1.0 CG A:ASP127 4.6 28.9 1.0

Cadmium binding site 3 out of 3 in the Cubic Crystal Structure Recombinant Horse L Apoferritin


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Cubic Crystal Structure Recombinant Horse L Apoferritin within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd203 b:7.8 occ:0.50 OD2 A:ASP80 2.4 21.5 1.0 OD1 A:ASP80 2.9 15.2 1.0 CG A:ASP80 3.0 17.9 1.0 CB A:ASP80 4.4 14.2 1.0 O A:HOH272 4.6 20.4 1.0

B.Gallois, B.L.Destaintot, M.A.Michaux, A.Dautant, T.Granier, G.Precigoux, J.A.Soruco, F.Roland, O.Chavasalba, A.Herbas, R.R.Crichton. X-Ray Structure of Recombinant Horse L-Chain Apoferritin at 2.0 Angstrom Resolution: Implications For Stability and Function. J.Biol.Inorg.Chem. V. 2 360 1997.
ISSN: ISSN 0949-8257