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Cadmium in PDB 1eu1: The Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments.

Protein crystallography data

The structure of The Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments., PDB code: 1eu1 was solved by H.K.Li, K.Temple, K.V.Rajagopalan, H.Schindelin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.30
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 102.176, 141.718, 59.812, 90.00, 90.00, 90.00
R / Rfree (%) 12.1 / 14.5

Other elements in 1eu1:

The structure of The Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments. also contains other interesting chemical elements:

Molybdenum (Mo) 2 atoms

Cadmium Binding Sites:

The binding sites of Cadmium atom in the The Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments. (pdb code 1eu1). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the The Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments., PDB code: 1eu1:

Cadmium binding site 1 out of 1 in 1eu1

Go back to Cadmium Binding Sites List in 1eu1
Cadmium binding site 1 out of 1 in the The Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of The Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd2006

b:12.0
occ:0.50
OD2 A:ASP91 2.6 13.4 1.0
OD1 A:ASP87 2.7 15.1 1.0
OD1 A:ASP91 2.7 13.0 1.0
OD2 A:ASP87 3.0 12.9 1.0
CG A:ASP91 3.1 12.2 1.0
CG A:ASP87 3.3 12.8 1.0
NH1 A:ARG521 4.1 13.4 1.0
CB A:ASP91 4.5 11.8 1.0
O A:ASP87 4.5 11.5 1.0
NE A:ARG521 4.6 13.1 1.0
CB A:ASP87 4.7 12.6 1.0
CZ A:ARG521 4.8 13.3 1.0
O A:HOH3464 4.9 18.1 1.0
O A:HOH3804 5.0 27.4 1.0

Reference:

H.K.Li, K.Temple, K.V.Rajagopalan, H.Schindelin. The 1.3 A Crystal Structure of Rhodobacter Sphaeroides Dimethylsulfoxide Reductase Reveals Two Distinct Molybdenum Coordination Environments J.Am.Chem.Soc. V. 122 7673 2000.
ISSN: ISSN 0002-7863
DOI: 10.1021/JA000643E
Page generated: Sat Dec 12 08:08:57 2020

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