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Cadmium in PDB 1fe0: Crystal Structure of Cadmium-HAH1

Protein crystallography data

The structure of Crystal Structure of Cadmium-HAH1, PDB code: 1fe0 was solved by A.K.Wernimont, D.L.Huffman, A.L.Lamb, T.V.O'halloran, A.C.Rosenzweig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.75
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 78.140, 78.140, 54.420, 90.00, 90.00, 120.00
R / Rfree (%) 19.1 / 21.3

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Crystal Structure of Cadmium-HAH1 (pdb code 1fe0). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Crystal Structure of Cadmium-HAH1, PDB code: 1fe0:

Cadmium binding site 1 out of 1 in 1fe0

Go back to Cadmium Binding Sites List in 1fe0
Cadmium binding site 1 out of 1 in the Crystal Structure of Cadmium-HAH1


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Cadmium-HAH1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd208

b:16.9
occ:1.00
SG A:CYS12 2.4 15.9 1.0
SG B:CYS12 2.4 15.8 1.0
SG A:CYS15 2.5 13.8 1.0
SG B:CYS15 2.5 15.8 1.0
CB B:CYS12 3.4 15.2 1.0
CB A:CYS12 3.5 15.2 1.0
CB A:CYS15 3.6 14.1 1.0
N A:CYS15 3.7 14.1 1.0
CB B:CYS15 3.7 14.4 1.0
N B:CYS15 3.8 14.6 1.0
N A:CYS12 4.0 14.8 1.0
N B:CYS12 4.0 15.4 1.0
CA A:CYS15 4.0 14.0 1.0
CA B:CYS15 4.1 14.8 1.0
CA A:CYS12 4.2 14.9 1.0
CA B:CYS12 4.2 15.2 1.0
OG1 A:THR11 4.2 15.4 1.0
OG1 B:THR11 4.2 18.3 1.0
C A:THR11 4.4 15.2 1.0
O A:HOH212 4.5 23.5 1.0
C A:GLY14 4.5 14.7 1.0
C B:THR11 4.5 16.6 1.0
O A:CYS12 4.5 14.6 1.0
O B:CYS12 4.6 14.7 1.0
C A:CYS12 4.6 15.3 1.0
C B:GLY14 4.6 15.1 1.0
C B:CYS12 4.6 14.8 1.0
N A:THR11 4.7 14.6 1.0
CA A:GLY14 4.8 15.0 1.0
N B:THR11 4.8 16.3 1.0
O A:THR11 4.9 15.8 1.0
CA B:GLY14 4.9 15.1 1.0
CA A:THR11 4.9 15.1 1.0
N A:GLY14 4.9 15.1 1.0
N B:GLY14 5.0 15.0 1.0

Reference:

A.K.Wernimont, D.L.Huffman, A.L.Lamb, T.V.O'halloran, A.C.Rosenzweig. Structural Basis For Copper Transfer By the Metallochaperone For the Menkes/Wilson Disease Proteins. Nat.Struct.Biol. V. 7 766 2000.
ISSN: ISSN 1072-8368
PubMed: 10966647
DOI: 10.1038/78999
Page generated: Sat Dec 12 08:09:00 2020

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