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Cadmium in the structure of Aspartyl Dipeptidase (pdb 1fy2)

The binding sites of Cadmium atom in the structure of Aspartyl Dipeptidase (pdb code 1fy2). This binding sites where shown with 5.0 Angstroms radius around Cadmium atom.
The 1fy2 structure was solved by K.HAKANSSON, A.H.-J.WANG, C.G.MILLER, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)500.0-1.2
Space groupC121
a (A)91.986
b (A)42.690
c (A)62.496
alpha (°)90.00
beta (°)106.06
gamma (°)90.00
Rfactor (%)21.8
Rfree (%)23

Cadmium Binding Sites:

Cadmium binding site 1 out of 1 in 1fy2

Cadmium binding site 1 out of 1 in 1fy2
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stereopicture of Cadmium binding site 1 out of 1 in 1fy2
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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cadmium in the PDB 1fy2. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cadmium atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Leu223, A: Glu224, A: His227, A: Hoh1053, A: Hoh1068, A: Hoh1069, A: Hoh1110, A: Hoh1119, A: Hoh1173,

conact list:

AtomAtomDistance (A)
CdCD2 A:Leu2234.76
CdN A:Glu2244.84
CdOE1 A:Glu2242.58
CdOE2 A:Glu2242.59
CdCD A:Glu2242.95
CdCG A:Glu2244.48
CdNE2 A:His2274.24
CdCB A:His2273.79
CdND1 A:His2272.25
CdCD2 A:His2274.40
CdCE1 A:His2273.06
CdCG A:His2273.35
CdCA A:His2274.37
CdO A:Hoh10534.53
CdO A:Hoh10682.51
CdO A:Hoh10694.34
CdO A:Hoh11102.49
CdO A:Hoh11194.14
CdO A:Hoh11734.73

interactive model:

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