Cadmium in PDB 1ji9: Solution Structure of the Alpha-Domain of Mouse Metallothionein-3

The binding sites of Cadmium atom in the Solution Structure of the Alpha-Domain of Mouse Metallothionein-3 (pdb code 1ji9). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 4 binding sites of Cadmium where determined in the Solution Structure of the Alpha-Domain of Mouse Metallothionein-3, PDB code: 1ji9:
Jump to Cadmium binding site number: 1; 2; 3; 4;

Cadmium binding site 1 out of 4 in the Solution Structure of the Alpha-Domain of Mouse Metallothionein-3


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Solution Structure of the Alpha-Domain of Mouse Metallothionein-3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd69 b:0.4 occ:1.00 HG A:CYS51 1.6 1.3 1.0 HG A:CYS67 2.1 0.8 1.0 SG A:CYS67 2.5 0.4 1.0 SG A:CYS51 2.5 0.7 1.0 SG A:CYS64 2.5 0.6 1.0 SG A:CYS66 2.5 1.1 1.0 HG A:CYS64 2.5 0.9 1.0 H A:CYS67 2.7 0.5 1.0 HG A:CYS66 2.9 1.0 1.0 HB2 A:CYS64 3.1 0.5 1.0 H A:CYS66 3.3 0.5 1.0 HG22 A:VAL50 3.4 1.0 1.0 CB A:CYS64 3.4 0.4 1.0 HG A:CYS38 3.4 0.9 1.0 HB2 A:CYS67 3.4 0.5 1.0 HB3 A:CYS51 3.4 1.2 1.0 N A:CYS67 3.5 0.5 1.0 CD A:CD72 3.6 0.4 1.0 HB2 A:CYS66 3.6 0.9 1.0 CB A:CYS67 3.6 0.5 1.0 CD A:CD71 3.6 0.3 1.0 CB A:CYS51 3.6 0.6 1.0 CB A:CYS66 3.6 0.5 1.0 HB3 A:CYS64 3.7 0.4 1.0 SG A:CYS38 3.9 0.3 1.0 HG21 A:VAL50 3.9 1.0 1.0 HG A:CYS37 3.9 0.9 1.0 N A:CYS66 4.1 0.5 1.0 CG2 A:VAL50 4.1 0.5 1.0 CA A:CYS66 4.2 0.6 1.0 CA A:CYS67 4.3 0.5 1.0 C A:CYS66 4.3 0.5 1.0 HB2 A:CYS51 4.4 1.1 1.0 H A:SER65 4.5 0.5 1.0 HB3 A:CYS67 4.5 0.7 1.0 H A:CYS51 4.5 0.5 1.0 HB3 A:CYS66 4.6 0.9 1.0 N A:CYS51 4.6 0.5 1.0 CA A:CYS51 4.6 0.5 1.0 HB2 A:CYS37 4.6 0.3 1.0 CA A:CYS64 4.7 0.5 1.0 H A:GLN68 4.7 0.7 1.0 HA A:CYS67 4.8 0.5 1.0 HG23 A:VAL50 4.8 1.0 1.0 HG A:CYS45 4.8 0.7 1.0 HA A:CYS51 4.8 0.7 1.0 N A:SER65 4.8 0.5 1.0 HG A:CYS42 4.8 0.9 1.0 HB3 A:LYS44 4.9 0.4 1.0 SG A:CYS37 4.9 0.4 1.0 HB A:VAL50 4.9 0.6 1.0

Cadmium binding site 2 out of 4 in the Solution Structure of the Alpha-Domain of Mouse Metallothionein-3


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Solution Structure of the Alpha-Domain of Mouse Metallothionein-3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd70 b:0.4 occ:1.00 HG A:CYS35 2.1 1.3 1.0 SG A:CYS35 2.5 0.6 1.0 SG A:CYS49 2.5 0.5 1.0 SG A:CYS45 2.5 0.3 1.0 SG A:CYS34 2.5 0.6 1.0 HG A:CYS49 2.7 1.0 1.0 O A:CYS34 2.9 0.5 1.0 HA A:CYS49 3.0 0.3 1.0 HG A:CYS45 3.1 0.7 1.0 HB3 A:CYS45 3.1 0.2 1.0 HB2 A:CYS35 3.2 1.5 1.0 HG A:CYS34 3.3 1.1 1.0 CB A:CYS45 3.4 0.2 1.0 CB A:CYS35 3.5 0.8 1.0 CB A:CYS49 3.6 0.4 1.0 C A:CYS34 3.7 0.5 1.0 HB2 A:CYS34 3.7 1.5 1.0 HB2 A:CYS38 3.7 0.3 1.0 CA A:CYS49 3.7 0.4 1.0 CB A:CYS34 3.8 0.8 1.0 CD A:CD72 3.9 0.4 1.0 HB2 A:CYS49 3.9 0.4 1.0 HG A:CYS38 4.0 0.9 1.0 HB2 A:CYS45 4.0 0.2 1.0 H A:CYS51 4.1 0.5 1.0 SG A:CYS51 4.2 0.7 1.0 O A:SER33 4.2 1.9 1.0 HB3 A:CYS35 4.2 1.5 1.0 CD A:CD71 4.2 0.3 1.0 CA A:CYS34 4.4 0.6 1.0 N A:CYS35 4.4 0.5 1.0 CB A:CYS38 4.5 0.2 1.0 CA A:CYS35 4.5 0.5 1.0 C A:CYS49 4.5 0.4 1.0 HB3 A:CYS38 4.5 0.3 1.0 HA A:CYS35 4.6 0.6 1.0 HA A:CYS45 4.6 0.2 1.0 HB3 A:CYS49 4.6 0.5 1.0 H A:VAL50 4.6 0.5 1.0 CA A:CYS45 4.6 0.2 1.0 HB3 A:CYS34 4.6 1.4 1.0 SG A:CYS38 4.7 0.3 1.0 N A:VAL50 4.9 0.4 1.0 N A:CYS49 4.9 0.4 1.0 HB3 A:CYS42 4.9 0.2 1.0 HG A:CYS51 5.0 1.3 1.0 HG22 A:VAL50 5.0 1.0 1.0 HB2 A:CYS51 5.0 1.1 1.0 N A:CYS51 5.0 0.5 1.0

Cadmium binding site 3 out of 4 in the Solution Structure of the Alpha-Domain of Mouse Metallothionein-3


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Solution Structure of the Alpha-Domain of Mouse Metallothionein-3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd71 b:0.3 occ:1.00 HG A:CYS42 1.7 0.9 1.0 HG A:CYS67 1.9 0.8 1.0 HG A:CYS38 2.0 0.9 1.0 SG A:CYS38 2.5 0.3 1.0 SG A:CYS42 2.5 0.3 1.0 SG A:CYS67 2.5 0.4 1.0 SG A:CYS45 2.5 0.3 1.0 HG A:CYS45 2.9 0.7 1.0 HB2 A:LYS44 2.9 0.5 1.0 HB3 A:CYS38 3.1 0.3 1.0 CB A:CYS38 3.4 0.2 1.0 HB3 A:CYS42 3.4 0.2 1.0 HG22 A:VAL50 3.4 1.0 1.0 HB2 A:CYS45 3.4 0.2 1.0 HB3 A:CYS67 3.5 0.7 1.0 CB A:CYS67 3.5 0.5 1.0 CB A:CYS42 3.5 0.3 1.0 HG A:CYS51 3.5 1.3 1.0 CD A:CD69 3.6 0.4 1.0 HG23 A:VAL50 3.6 1.0 1.0 CB A:CYS45 3.6 0.2 1.0 CD A:CD72 3.6 0.4 1.0 SG A:CYS51 3.7 0.7 1.0 HB2 A:CYS67 3.7 0.5 1.0 HB3 A:LYS44 3.7 0.4 1.0 HB2 A:CYS38 3.8 0.3 1.0 CB A:LYS44 3.8 0.3 1.0 HG21 A:VAL50 3.8 1.0 1.0 CG2 A:VAL50 3.8 0.5 1.0 HB2 A:CYS42 3.9 0.3 1.0 HG A:CYS35 4.0 1.3 1.0 H A:CYS45 4.0 0.2 1.0 N A:CYS45 4.1 0.2 1.0 CD A:CD70 4.2 0.4 1.0 CA A:CYS45 4.4 0.2 1.0 HB3 A:CYS45 4.5 0.2 1.0 C A:LYS44 4.5 0.3 1.0 SG A:CYS64 4.6 0.6 1.0 HG A:CYS64 4.6 0.9 1.0 HA A:CYS45 4.6 0.2 1.0 H A:LYS44 4.7 0.3 1.0 HG3 A:LYS44 4.7 0.4 1.0 CA A:CYS38 4.7 0.2 1.0 H A:VAL50 4.7 0.5 1.0 HA A:CYS38 4.7 0.3 1.0 H A:CYS51 4.7 0.5 1.0 CA A:LYS44 4.7 0.3 1.0 CG A:LYS44 4.8 0.4 1.0 CA A:CYS42 4.8 0.3 1.0 CA A:CYS67 4.9 0.5 1.0 H A:CYS67 4.9 0.5 1.0 SG A:CYS35 4.9 0.6 1.0 HD2 A:PRO39 4.9 0.3 1.0 HA A:CYS49 5.0 0.3 1.0

Cadmium binding site 4 out of 4 in the Solution Structure of the Alpha-Domain of Mouse Metallothionein-3


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of Solution Structure of the Alpha-Domain of Mouse Metallothionein-3 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd72 b:0.4 occ:1.00 HG A:CYS37 1.7 0.9 1.0 HG A:CYS38 1.9 0.9 1.0 HG A:CYS35 1.9 1.3 1.0 SG A:CYS35 2.5 0.6 1.0 SG A:CYS38 2.5 0.3 1.0 SG A:CYS51 2.5 0.7 1.0 SG A:CYS37 2.5 0.4 1.0 HG A:CYS51 2.7 1.3 1.0 HB3 A:CYS35 3.1 1.5 1.0 HB2 A:CYS38 3.2 0.3 1.0 CB A:CYS35 3.4 0.8 1.0 HB2 A:CYS51 3.4 1.1 1.0 CB A:CYS38 3.5 0.2 1.0 CD A:CD69 3.6 0.4 1.0 CB A:CYS51 3.6 0.6 1.0 SG A:CYS64 3.6 0.6 1.0 CD A:CD71 3.6 0.3 1.0 HB2 A:CYS37 3.7 0.3 1.0 H A:CYS37 3.7 0.3 1.0 CB A:CYS37 3.7 0.4 1.0 CD A:CD70 3.9 0.4 1.0 H A:CYS38 3.9 0.3 1.0 N A:CYS38 3.9 0.2 1.0 HG A:CYS67 3.9 0.8 1.0 HB2 A:CYS35 3.9 1.5 1.0 HB3 A:CYS64 4.0 0.4 1.0 HB3 A:CYS51 4.0 1.2 1.0 C A:CYS37 4.0 0.2 1.0 CA A:CYS37 4.2 0.3 1.0 HB3 A:CYS38 4.3 0.3 1.0 SG A:CYS45 4.3 0.3 1.0 N A:CYS37 4.3 0.3 1.0 HG A:CYS64 4.4 0.9 1.0 CB A:CYS64 4.4 0.4 1.0 CA A:CYS38 4.4 0.2 1.0 O A:CYS37 4.5 0.3 1.0 H A:CYS51 4.6 0.5 1.0 HG A:CYS45 4.6 0.7 1.0 HB3 A:CYS37 4.6 0.4 1.0 HB3 A:ALA59 4.6 1.4 1.0 H A:SER36 4.7 0.7 1.0 HA A:CYS35 4.7 0.6 1.0 CA A:CYS35 4.7 0.5 1.0 HG A:CYS49 4.8 1.0 1.0 HG22 A:VAL50 4.8 1.0 1.0 HG A:CYS42 4.8 0.9 1.0 SG A:CYS67 4.9 0.4 1.0 CA A:CYS51 4.9 0.5 1.0 HB2 A:CYS64 4.9 0.5 1.0 HA A:CYS38 5.0 0.3 1.0 HA A:ALA59 5.0 0.9 1.0

G.Oz, K.Zangger, I.M.Armitage. Three-Dimensional Structure and Dynamics of A Brain Specific Growth Inhibitory Factor: Metallothionein-3. Biochemistry V. 40 11433 2001.
ISSN: ISSN 0006-2960
PubMed: 11560491
DOI: 10.1021/BI010827L