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Cadmium in PDB 1ljo: Crystal Structure of An Sm-Like Protein (Af-SM2) From Archaeoglobus Fulgidus at 1.95A Resolution

Protein crystallography data

The structure of Crystal Structure of An Sm-Like Protein (Af-SM2) From Archaeoglobus Fulgidus at 1.95A Resolution, PDB code: 1ljo was solved by I.Toro, J.Basquin, H.Teo-Dreher, D.Suck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.10 / 1.95
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 58.420, 58.420, 32.084, 90.00, 90.00, 120.00
R / Rfree (%) 19.4 / 21.1

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Crystal Structure of An Sm-Like Protein (Af-SM2) From Archaeoglobus Fulgidus at 1.95A Resolution (pdb code 1ljo). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Crystal Structure of An Sm-Like Protein (Af-SM2) From Archaeoglobus Fulgidus at 1.95A Resolution, PDB code: 1ljo:

Cadmium binding site 1 out of 1 in 1ljo

Go back to Cadmium Binding Sites List in 1ljo
Cadmium binding site 1 out of 1 in the Crystal Structure of An Sm-Like Protein (Af-SM2) From Archaeoglobus Fulgidus at 1.95A Resolution


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of An Sm-Like Protein (Af-SM2) From Archaeoglobus Fulgidus at 1.95A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd78

b:61.7
occ:0.17
O A:HOH444 3.7 39.2 0.2
NZ A:LYS23 4.1 29.4 1.0
CE A:LYS23 4.2 31.5 1.0
CD A:LYS23 4.3 30.7 1.0
O A:HOH405 4.6 42.4 1.0

Reference:

I.Toro, J.Basquin, H.Teo-Dreher, D.Suck. Archaeal Sm Proteins Form Heptameric and Hexameric Complexes: Crystal Structures of the SM1 and SM2 Proteins From the Hyperthermophile Archaeoglobus Fulgidus. J.Mol.Biol. V. 320 129 2002.
ISSN: ISSN 0022-2836
PubMed: 12079339
DOI: 10.1016/S0022-2836(02)00406-0
Page generated: Fri Aug 28 12:08:16 2020
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