Atomistry » Cadmium » PDB 1jv4-1mwr » 1mhu
Atomistry »
  Cadmium »
    PDB 1jv4-1mwr »
      1mhu »

Cadmium in PDB 1mhu: The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy

Cadmium Binding Sites:

The binding sites of Cadmium atom in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy (pdb code 1mhu). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 4 binding sites of Cadmium where determined in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy, PDB code: 1mhu:
Jump to Cadmium binding site number: 1; 2; 3; 4;

Cadmium binding site 1 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 1 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd101

b:1.0
occ:1.00
SG A:CYS60 2.5 1.4 1.0
SG A:CYS57 2.6 1.2 1.0
SG A:CYS59 2.6 1.7 1.0
SG A:CYS50 2.7 0.6 1.0
H A:CYS59 2.7 1.1 1.0
HB2 A:CYS57 3.0 0.8 1.0
HB2 A:CYS60 3.0 1.2 1.0
H A:CYS60 3.1 1.4 1.0
N A:CYS60 3.1 1.4 1.0
HA A:CYS50 3.1 0.6 1.0
HB2 A:CYS50 3.2 1.2 1.0
CB A:CYS60 3.2 1.4 1.0
CB A:CYS57 3.3 0.9 1.0
C A:CYS59 3.3 1.3 1.0
CB A:CYS50 3.4 0.8 1.0
CB A:CYS59 3.4 1.0 1.0
HB2 A:CYS59 3.4 1.2 1.0
N A:CYS59 3.5 1.3 1.0
CA A:CYS59 3.5 1.2 1.0
HB3 A:CYS57 3.6 0.8 1.0
H A:SER58 3.7 1.7 1.0
CA A:CYS60 3.8 1.6 1.0
CA A:CYS50 3.8 0.6 1.0
O A:CYS59 3.9 1.4 1.0
H A:GLY52 4.1 3.6 1.0
SG A:CYS37 4.1 1.7 1.0
HB3 A:CYS60 4.2 1.6 1.0
H A:LYS51 4.3 1.7 1.0
CD A:CD107 4.3 0.9 1.0
CD A:CD106 4.3 1.4 1.0
N A:SER58 4.4 1.6 1.0
HB3 A:CYS50 4.4 1.2 1.0
HB3 A:CYS59 4.4 1.6 1.0
HA A:CYS60 4.5 1.9 1.0
SG A:CYS36 4.6 3.2 1.0
HA3 A:GLY52 4.6 5.6 1.0
HA A:CYS59 4.6 1.4 1.0
CA A:CYS57 4.6 1.2 1.0
C A:SER58 4.7 1.7 1.0
C A:CYS50 4.7 0.8 1.0
N A:LYS51 4.8 0.9 1.0
C A:CYS60 4.8 1.9 1.0
HB3 A:LYS43 4.9 3.4 1.0
N A:CYS50 4.9 0.6 1.0
C A:CYS57 4.9 1.5 1.0
N A:GLY52 4.9 2.9 1.0

Cadmium binding site 2 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 2 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd105

b:1.0
occ:1.00
SG A:CYS34 2.5 1.1 1.0
SG A:CYS33 2.6 1.4 1.0
SG A:CYS48 2.7 1.6 1.0
SG A:CYS44 2.7 1.7 1.0
HB3 A:CYS44 2.9 1.7 1.0
HA A:CYS48 3.0 0.6 1.0
HB3 A:CYS33 3.0 1.2 1.0
HB3 A:CYS50 3.0 1.2 1.0
HB3 A:CYS34 3.2 1.1 1.0
HB2 A:CYS48 3.3 1.4 1.0
CB A:CYS33 3.4 1.3 1.0
CB A:CYS44 3.4 1.1 1.0
CB A:CYS48 3.4 1.0 1.0
CB A:CYS34 3.4 1.1 1.0
HB2 A:CYS50 3.7 1.2 1.0
CA A:CYS48 3.7 0.7 1.0
C A:CYS33 3.8 0.9 1.0
H A:CYS50 3.8 0.5 1.0
N A:CYS34 3.9 0.9 1.0
CB A:CYS50 3.9 0.8 1.0
O A:CYS33 4.0 1.1 1.0
HB2 A:CYS44 4.0 2.2 1.0
H A:CYS34 4.1 1.0 1.0
CA A:CYS33 4.2 0.9 1.0
HB2 A:CYS37 4.2 1.5 1.0
CD A:CD107 4.2 0.9 1.0
CA A:CYS34 4.2 0.9 1.0
HB2 A:CYS33 4.3 1.6 1.0
HB2 A:CYS34 4.3 1.1 1.0
HA A:CYS44 4.4 0.9 1.0
O A:GLY47 4.4 1.6 1.0
HB3 A:CYS48 4.4 1.1 1.0
C A:CYS48 4.5 0.7 1.0
CD A:CD106 4.5 1.4 1.0
CA A:CYS44 4.5 0.9 1.0
N A:CYS50 4.6 0.6 1.0
H A:ILE49 4.7 0.7 1.0
HA A:CYS34 4.7 1.0 1.0
HA A:CYS33 4.7 1.0 1.0
N A:ILE49 4.8 0.6 1.0
CA A:CYS50 4.8 0.6 1.0
N A:CYS48 4.9 0.6 1.0

Cadmium binding site 3 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 3 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd106

b:1.4
occ:1.00
SG A:CYS44 2.4 1.7 1.0
SG A:CYS37 2.6 1.7 1.0
SG A:CYS41 2.7 2.8 1.0
SG A:CYS60 2.7 1.4 1.0
HB2 A:CYS44 3.0 2.2 1.0
HB2 A:LYS43 3.1 3.4 1.0
HB3 A:CYS41 3.1 1.9 1.0
HB2 A:CYS50 3.1 1.2 1.0
HB3 A:CYS60 3.2 1.6 1.0
HB3 A:CYS37 3.3 1.7 1.0
CB A:CYS44 3.3 1.1 1.0
CB A:CYS60 3.4 1.4 1.0
CB A:CYS37 3.4 1.0 1.0
CB A:CYS41 3.4 0.9 1.0
HB2 A:CYS37 3.5 1.5 1.0
HB2 A:CYS60 3.6 1.2 1.0
O A:LYS43 3.7 2.9 1.0
C A:LYS43 3.7 1.7 1.0
HB2 A:CYS41 3.8 2.4 1.0
CB A:LYS43 3.9 3.0 1.0
N A:CYS44 4.0 0.9 1.0
HB3 A:LYS43 4.0 3.4 1.0
HB3 A:CYS44 4.1 1.7 1.0
CB A:CYS50 4.2 0.8 1.0
CA A:CYS44 4.2 0.9 1.0
CD A:CD107 4.2 0.9 1.0
CA A:LYS43 4.3 1.9 1.0
CD A:CD101 4.3 1.0 1.0
H A:LYS43 4.4 1.3 1.0
H A:CYS44 4.4 1.5 1.0
CD A:CD105 4.5 1.0 1.0
SG A:CYS34 4.5 1.1 1.0
HB3 A:CYS50 4.5 1.2 1.0
HA A:CYS44 4.6 0.9 1.0
N A:LYS43 4.7 1.0 1.0
CA A:CYS41 4.8 1.1 1.0
HD2 A:PRO38 4.8 1.2 1.0
CA A:CYS60 4.8 1.6 1.0
CA A:CYS37 4.8 0.9 1.0
SG A:CYS50 4.8 0.6 1.0
O A:CYS41 4.9 2.5 1.0
HG13 A:ILE49 5.0 3.5 1.0

Cadmium binding site 4 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 4 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd107

b:0.9
occ:1.00
SG A:CYS36 2.5 3.2 1.0
SG A:CYS34 2.5 1.1 1.0
SG A:CYS50 2.7 0.6 1.0
SG A:CYS37 2.7 1.7 1.0
H A:CYS37 2.8 1.0 1.0
HB2 A:CYS34 3.0 1.1 1.0
HB3 A:CYS36 3.0 1.4 1.0
HB3 A:CYS50 3.2 1.2 1.0
HB2 A:CYS37 3.2 1.5 1.0
N A:CYS37 3.2 0.9 1.0
CB A:CYS50 3.3 0.8 1.0
CB A:CYS36 3.3 1.4 1.0
CB A:CYS34 3.3 1.1 1.0
HB2 A:CYS50 3.3 1.2 1.0
CB A:CYS37 3.4 1.0 1.0
H A:CYS36 3.6 1.1 1.0
HB3 A:CYS34 3.8 1.1 1.0
C A:CYS36 3.8 1.4 1.0
CA A:CYS37 3.9 0.9 1.0
CA A:CYS36 3.9 1.2 1.0
HB3 A:CYS57 4.1 0.8 1.0
N A:CYS36 4.1 1.1 1.0
CD A:CD105 4.2 1.0 1.0
CD A:CD106 4.2 1.4 1.0
HB2 A:CYS36 4.2 1.5 1.0
CD A:CD101 4.3 1.0 1.0
HA A:CYS37 4.3 1.1 1.0
HB3 A:CYS37 4.4 1.7 1.0
CA A:CYS34 4.6 0.9 1.0
SG A:CYS44 4.7 1.7 1.0
O A:ALA53 4.7 3.6 1.0
O A:CYS36 4.7 2.2 1.0
CA A:CYS50 4.8 0.6 1.0
HB2 A:CYS60 4.8 1.2 1.0
C A:CYS34 4.9 1.0 1.0
SG A:CYS57 4.9 1.2 1.0
CB A:CYS57 4.9 0.9 1.0
HA A:CYS36 5.0 1.2 1.0
HA A:SER54 5.0 3.8 1.0

Reference:

B.A.Messerle, A.Schaffer, M.Vasak, J.H.Kagi, K.Wuthrich. Three-Dimensional Structure of Human [113CD7]Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy. J.Mol.Biol. V. 214 765 1990.
ISSN: ISSN 0022-2836
PubMed: 2388267
DOI: 10.1016/0022-2836(90)90291-S
Page generated: Sun Jan 24 09:41:56 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy