Atomistry » Cadmium » PDB 1jv4-1mwr » 1mhu
Atomistry »
  Cadmium »
    PDB 1jv4-1mwr »
      1mhu »

Cadmium in PDB 1mhu: The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy

Cadmium Binding Sites:

The binding sites of Cadmium atom in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy (pdb code 1mhu). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 4 binding sites of Cadmium where determined in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy, PDB code: 1mhu:
Jump to Cadmium binding site number: 1; 2; 3; 4;

Cadmium binding site 1 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 1 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd101

b:1.0
occ:1.00
SG A:CYS60 2.5 1.4 1.0
SG A:CYS57 2.6 1.2 1.0
SG A:CYS59 2.6 1.7 1.0
SG A:CYS50 2.7 0.6 1.0
H A:CYS59 2.7 1.1 1.0
HB2 A:CYS57 3.0 0.8 1.0
HB2 A:CYS60 3.0 1.2 1.0
H A:CYS60 3.1 1.4 1.0
N A:CYS60 3.1 1.4 1.0
HA A:CYS50 3.1 0.6 1.0
HB2 A:CYS50 3.2 1.2 1.0
CB A:CYS60 3.2 1.4 1.0
CB A:CYS57 3.3 0.9 1.0
C A:CYS59 3.3 1.3 1.0
CB A:CYS50 3.4 0.8 1.0
CB A:CYS59 3.4 1.0 1.0
HB2 A:CYS59 3.4 1.2 1.0
N A:CYS59 3.5 1.3 1.0
CA A:CYS59 3.5 1.2 1.0
HB3 A:CYS57 3.6 0.8 1.0
H A:SER58 3.7 1.7 1.0
CA A:CYS60 3.8 1.6 1.0
CA A:CYS50 3.8 0.6 1.0
O A:CYS59 3.9 1.4 1.0
H A:GLY52 4.1 3.6 1.0
SG A:CYS37 4.1 1.7 1.0
HB3 A:CYS60 4.2 1.6 1.0
H A:LYS51 4.3 1.7 1.0
CD A:CD107 4.3 0.9 1.0
CD A:CD106 4.3 1.4 1.0
N A:SER58 4.4 1.6 1.0
HB3 A:CYS50 4.4 1.2 1.0
HB3 A:CYS59 4.4 1.6 1.0
HA A:CYS60 4.5 1.9 1.0
SG A:CYS36 4.6 3.2 1.0
HA3 A:GLY52 4.6 5.6 1.0
HA A:CYS59 4.6 1.4 1.0
CA A:CYS57 4.6 1.2 1.0
C A:SER58 4.7 1.7 1.0
C A:CYS50 4.7 0.8 1.0
N A:LYS51 4.8 0.9 1.0
C A:CYS60 4.8 1.9 1.0
HB3 A:LYS43 4.9 3.4 1.0
N A:CYS50 4.9 0.6 1.0
C A:CYS57 4.9 1.5 1.0
N A:GLY52 4.9 2.9 1.0

Cadmium binding site 2 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 2 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd105

b:1.0
occ:1.00
SG A:CYS34 2.5 1.1 1.0
SG A:CYS33 2.6 1.4 1.0
SG A:CYS48 2.7 1.6 1.0
SG A:CYS44 2.7 1.7 1.0
HB3 A:CYS44 2.9 1.7 1.0
HA A:CYS48 3.0 0.6 1.0
HB3 A:CYS33 3.0 1.2 1.0
HB3 A:CYS50 3.0 1.2 1.0
HB3 A:CYS34 3.2 1.1 1.0
HB2 A:CYS48 3.3 1.4 1.0
CB A:CYS33 3.4 1.3 1.0
CB A:CYS44 3.4 1.1 1.0
CB A:CYS48 3.4 1.0 1.0
CB A:CYS34 3.4 1.1 1.0
HB2 A:CYS50 3.7 1.2 1.0
CA A:CYS48 3.7 0.7 1.0
C A:CYS33 3.8 0.9 1.0
H A:CYS50 3.8 0.5 1.0
N A:CYS34 3.9 0.9 1.0
CB A:CYS50 3.9 0.8 1.0
O A:CYS33 4.0 1.1 1.0
HB2 A:CYS44 4.0 2.2 1.0
H A:CYS34 4.1 1.0 1.0
CA A:CYS33 4.2 0.9 1.0
HB2 A:CYS37 4.2 1.5 1.0
CD A:CD107 4.2 0.9 1.0
CA A:CYS34 4.2 0.9 1.0
HB2 A:CYS33 4.3 1.6 1.0
HB2 A:CYS34 4.3 1.1 1.0
HA A:CYS44 4.4 0.9 1.0
O A:GLY47 4.4 1.6 1.0
HB3 A:CYS48 4.4 1.1 1.0
C A:CYS48 4.5 0.7 1.0
CD A:CD106 4.5 1.4 1.0
CA A:CYS44 4.5 0.9 1.0
N A:CYS50 4.6 0.6 1.0
H A:ILE49 4.7 0.7 1.0
HA A:CYS34 4.7 1.0 1.0
HA A:CYS33 4.7 1.0 1.0
N A:ILE49 4.8 0.6 1.0
CA A:CYS50 4.8 0.6 1.0
N A:CYS48 4.9 0.6 1.0

Cadmium binding site 3 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 3 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd106

b:1.4
occ:1.00
SG A:CYS44 2.4 1.7 1.0
SG A:CYS37 2.6 1.7 1.0
SG A:CYS41 2.7 2.8 1.0
SG A:CYS60 2.7 1.4 1.0
HB2 A:CYS44 3.0 2.2 1.0
HB2 A:LYS43 3.1 3.4 1.0
HB3 A:CYS41 3.1 1.9 1.0
HB2 A:CYS50 3.1 1.2 1.0
HB3 A:CYS60 3.2 1.6 1.0
HB3 A:CYS37 3.3 1.7 1.0
CB A:CYS44 3.3 1.1 1.0
CB A:CYS60 3.4 1.4 1.0
CB A:CYS37 3.4 1.0 1.0
CB A:CYS41 3.4 0.9 1.0
HB2 A:CYS37 3.5 1.5 1.0
HB2 A:CYS60 3.6 1.2 1.0
O A:LYS43 3.7 2.9 1.0
C A:LYS43 3.7 1.7 1.0
HB2 A:CYS41 3.8 2.4 1.0
CB A:LYS43 3.9 3.0 1.0
N A:CYS44 4.0 0.9 1.0
HB3 A:LYS43 4.0 3.4 1.0
HB3 A:CYS44 4.1 1.7 1.0
CB A:CYS50 4.2 0.8 1.0
CA A:CYS44 4.2 0.9 1.0
CD A:CD107 4.2 0.9 1.0
CA A:LYS43 4.3 1.9 1.0
CD A:CD101 4.3 1.0 1.0
H A:LYS43 4.4 1.3 1.0
H A:CYS44 4.4 1.5 1.0
CD A:CD105 4.5 1.0 1.0
SG A:CYS34 4.5 1.1 1.0
HB3 A:CYS50 4.5 1.2 1.0
HA A:CYS44 4.6 0.9 1.0
N A:LYS43 4.7 1.0 1.0
CA A:CYS41 4.8 1.1 1.0
HD2 A:PRO38 4.8 1.2 1.0
CA A:CYS60 4.8 1.6 1.0
CA A:CYS37 4.8 0.9 1.0
SG A:CYS50 4.8 0.6 1.0
O A:CYS41 4.9 2.5 1.0
HG13 A:ILE49 5.0 3.5 1.0

Cadmium binding site 4 out of 4 in 1mhu

Go back to Cadmium Binding Sites List in 1mhu
Cadmium binding site 4 out of 4 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd107

b:0.9
occ:1.00
SG A:CYS36 2.5 3.2 1.0
SG A:CYS34 2.5 1.1 1.0
SG A:CYS50 2.7 0.6 1.0
SG A:CYS37 2.7 1.7 1.0
H A:CYS37 2.8 1.0 1.0
HB2 A:CYS34 3.0 1.1 1.0
HB3 A:CYS36 3.0 1.4 1.0
HB3 A:CYS50 3.2 1.2 1.0
HB2 A:CYS37 3.2 1.5 1.0
N A:CYS37 3.2 0.9 1.0
CB A:CYS50 3.3 0.8 1.0
CB A:CYS36 3.3 1.4 1.0
CB A:CYS34 3.3 1.1 1.0
HB2 A:CYS50 3.3 1.2 1.0
CB A:CYS37 3.4 1.0 1.0
H A:CYS36 3.6 1.1 1.0
HB3 A:CYS34 3.8 1.1 1.0
C A:CYS36 3.8 1.4 1.0
CA A:CYS37 3.9 0.9 1.0
CA A:CYS36 3.9 1.2 1.0
HB3 A:CYS57 4.1 0.8 1.0
N A:CYS36 4.1 1.1 1.0
CD A:CD105 4.2 1.0 1.0
CD A:CD106 4.2 1.4 1.0
HB2 A:CYS36 4.2 1.5 1.0
CD A:CD101 4.3 1.0 1.0
HA A:CYS37 4.3 1.1 1.0
HB3 A:CYS37 4.4 1.7 1.0
CA A:CYS34 4.6 0.9 1.0
SG A:CYS44 4.7 1.7 1.0
O A:ALA53 4.7 3.6 1.0
O A:CYS36 4.7 2.2 1.0
CA A:CYS50 4.8 0.6 1.0
HB2 A:CYS60 4.8 1.2 1.0
C A:CYS34 4.9 1.0 1.0
SG A:CYS57 4.9 1.2 1.0
CB A:CYS57 4.9 0.9 1.0
HA A:CYS36 5.0 1.2 1.0
HA A:SER54 5.0 3.8 1.0

Reference:

B.A.Messerle, A.Schaffer, M.Vasak, J.H.Kagi, K.Wuthrich. Three-Dimensional Structure of Human [113CD7]Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy. J.Mol.Biol. V. 214 765 1990.
ISSN: ISSN 0022-2836
PubMed: 2388267
DOI: 10.1016/0022-2836(90)90291-S
Page generated: Fri Jul 19 13:52:15 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy