Cadmium in PDB 1ue5: Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis

The structure of Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis, PDB code: 1ue5 was solved by K.Saikrishnan, J.Jeyakanthan, J.Venkatesh, N.Acharya, K.Sekar, U.Varshney, M.Vijayan, Tb Structural Genomics Consortium (Tbsgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	15.00 / 2.60
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	79.484, 79.484, 78.404, 90.00, 90.00, 120.00
R / Rfree (%)	21.2 / 27.5

The binding sites of Cadmium atom in the Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis (pdb code 1ue5). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 2 binding sites of Cadmium where determined in the Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis, PDB code: 1ue5:
Jump to Cadmium binding site number: 1; 2;

Cadmium binding site 1 out of 2 in the Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ B:Cd400 b:0.5 occ:1.00 OD2 B:ASP16 2.5 56.2 1.0 OD1 B:ASP16 2.7 73.0 1.0 CG B:ASP16 2.9 61.0 1.0 O B:HOH444 3.3 54.4 1.0 O B:HOH443 3.5 46.4 1.0 NH2 B:ARG73 4.0 0.5 1.0 CB B:THR72 4.1 39.2 1.0 CG2 B:THR72 4.4 53.1 1.0 CB B:ASP16 4.5 49.2 1.0 N B:ARG73 4.5 51.4 1.0 CZ B:ARG73 4.8 95.6 1.0 CB B:ARG73 4.8 58.2 1.0 NH1 B:ARG73 4.9 87.5 1.0 OG1 B:THR72 4.9 28.5 1.0 CA B:THR72 5.0 44.9 1.0

Cadmium binding site 2 out of 2 in the Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Crystal Structure of the Single-Stranded Dna-Binding Protein From Mycobacterium Tuberculosis within 5.0Å range: probe atom residue distance (Å) B Occ B:Cd401 b:53.5 occ:1.00 OE2 B:GLU65 2.0 71.2 1.0 OE2 B:GLU62 2.0 95.0 1.0 OE1 B:GLU62 2.1 0.6 1.0 CD B:GLU62 2.3 95.2 1.0 OE1 B:GLU65 2.5 67.0 1.0 CD B:GLU65 2.6 59.3 1.0 O B:HOH402 2.9 3.0 1.0 CG B:GLU62 3.8 81.3 1.0 CG B:GLU65 4.1 54.2 1.0 CA B:GLU62 4.4 40.9 1.0 N B:GLU62 4.5 37.5 1.0 CB B:GLU62 4.5 56.2 1.0 C B:ARG61 4.8 37.0 1.0 CB B:GLU65 4.9 37.5 1.0

K.Saikrishnan, J.Jeyakanthan, J.Venkatesh, N.Acharya, K.Sekar, U.Varshney, M.Vijayan. Structure of Mycobacterium Tuberculosis Single-Stranded Dna-Binding Protein. Variability in Quaternary Structure and Its Implications J.Mol.Biol. V. 331 385 2003.
ISSN: ISSN 0022-2836
PubMed: 12888346
DOI: 10.1016/S0022-2836(03)00729-0