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Cadmium in PDB 1ur5: Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
Enzymatic activity of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
All present enzymatic activity of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface:
1.1.1.37;
1.1.1.37;
Protein crystallography data
The structure of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface, PDB code: 1ur5
was solved by
A.Bjork,
B.Dalhus,
D.Mantzilas,
V.G.H.Eijsink,
R.Sirevag,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 25.00 / 1.75 |
| Space group | P 31 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 105.575, 105.575, 102.531, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 19 / 22.3 |
Other elements in 1ur5:
The structure of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface also contains other interesting chemical elements:
| Chlorine | (Cl) | 1 atom |
| Sodium | (Na) | 2 atoms |
Cadmium Binding Sites:
The binding sites of Cadmium atom in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
(pdb code 1ur5). This binding sites where shown within
5.0 Angstroms radius around Cadmium atom.
In total 6 binding sites of Cadmium where determined in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface, PDB code: 1ur5:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Cadmium where determined in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface, PDB code: 1ur5:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5; 6;
Cadmium binding site 1 out of 6 in 1ur5
Go back to
Cadmium Binding Sites List in 1ur5
Cadmium binding site 1 out
of 6 in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 1 of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface within 5.0Å range:
|
Cadmium binding site 2 out of 6 in 1ur5
Go back to
Cadmium Binding Sites List in 1ur5
Cadmium binding site 2 out
of 6 in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 2 of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface within 5.0Å range:
|
Cadmium binding site 3 out of 6 in 1ur5
Go back to
Cadmium Binding Sites List in 1ur5
Cadmium binding site 3 out
of 6 in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 3 of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface within 5.0Å range:
|
Cadmium binding site 4 out of 6 in 1ur5
Go back to
Cadmium Binding Sites List in 1ur5
Cadmium binding site 4 out
of 6 in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 4 of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface within 5.0Å range:
|
Cadmium binding site 5 out of 6 in 1ur5
Go back to
Cadmium Binding Sites List in 1ur5
Cadmium binding site 5 out
of 6 in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 5 of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface within 5.0Å range:
|
Cadmium binding site 6 out of 6 in 1ur5
Go back to
Cadmium Binding Sites List in 1ur5
Cadmium binding site 6 out
of 6 in the Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 6 of Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer/Dimer Interface within 5.0Å range:
|
Reference:
A.Bjork,
B.Dalhus,
D.Mantzilas,
V.G.H.Eijsink,
R.Sirevag.
Stabilization of A Tetrameric Malate Dehydrogenase By Introduction of A Disulfide Bridge at the Dimer-Dimer Interface J.Mol.Biol. V. 334 811 2003.
ISSN: ISSN 0022-2836
PubMed: 14636605
DOI: 10.1016/J.JMB.2003.10.006
Page generated: Sat Dec 12 08:12:46 2020
ISSN: ISSN 0022-2836
PubMed: 14636605
DOI: 10.1016/J.JMB.2003.10.006
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