Cadmium in PDB 1wjf: Solution Structure of H12C Mutant of the N-Terminal Zn Binding Domain of Hiv-1 Integrase Complexed to Cadmium, uc(Nmr), 40 Structures

The binding sites of Cadmium atom in the Solution Structure of H12C Mutant of the N-Terminal Zn Binding Domain of Hiv-1 Integrase Complexed to Cadmium, uc(Nmr), 40 Structures (pdb code 1wjf). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 2 binding sites of Cadmium where determined in the Solution Structure of H12C Mutant of the N-Terminal Zn Binding Domain of Hiv-1 Integrase Complexed to Cadmium, uc(Nmr), 40 Structures, PDB code: 1wjf:
Jump to Cadmium binding site number: 1; 2;

Cadmium binding site 1 out of 2 in the Solution Structure of H12C Mutant of the N-Terminal Zn Binding Domain of Hiv-1 Integrase Complexed to Cadmium, uc(Nmr), 40 Structures


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Solution Structure of H12C Mutant of the N-Terminal Zn Binding Domain of Hiv-1 Integrase Complexed to Cadmium, uc(Nmr), 40 Structures within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd56 b:0.0 occ:1.00 SG A:CYS40 2.6 0.0 1.0 SG A:CYS43 2.6 0.0 1.0 SG A:CYS12 2.6 0.0 1.0 HB3 A:CYS12 3.3 0.0 1.0 CB A:CYS40 3.4 0.0 1.0 HB2 A:CYS40 3.5 0.0 1.0 HB3 A:CYS40 3.5 0.0 1.0 CB A:CYS12 3.6 0.0 1.0 HB2 A:CYS43 3.7 0.0 1.0 H A:CYS43 3.7 0.0 1.0 HB2 A:LYS42 3.8 0.0 1.0 CB A:CYS43 3.9 0.0 1.0 HA A:GLU13 4.0 0.0 1.0 C A:CYS12 4.2 0.0 1.0 O A:CYS12 4.3 0.0 1.0 N A:GLU13 4.3 0.0 1.0 N A:CYS43 4.4 0.0 1.0 HB2 A:CYS12 4.4 0.0 1.0 CA A:CYS12 4.5 0.0 1.0 HB3 A:CYS43 4.6 0.0 1.0 H A:GLU13 4.6 0.0 1.0 CA A:GLU13 4.7 0.0 1.0 CA A:CYS43 4.8 0.0 1.0 HA A:HIS16 4.8 0.0 1.0 CB A:LYS42 4.9 0.0 1.0 CA A:CYS40 4.9 0.0 1.0 HA A:VAL37 4.9 0.0 1.0 H A:LYS42 4.9 0.0 1.0 O A:HIS16 4.9 0.0 1.0 HB2 A:GLU13 4.9 0.0 1.0 HD2 A:LYS42 5.0 0.0 1.0

Cadmium binding site 2 out of 2 in the Solution Structure of H12C Mutant of the N-Terminal Zn Binding Domain of Hiv-1 Integrase Complexed to Cadmium, uc(Nmr), 40 Structures


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Solution Structure of H12C Mutant of the N-Terminal Zn Binding Domain of Hiv-1 Integrase Complexed to Cadmium, uc(Nmr), 40 Structures within 5.0Å range: probe atom residue distance (Å) B Occ B:Cd56 b:0.0 occ:1.00 SG B:CYS40 2.6 0.0 1.0 SG B:CYS43 2.6 0.0 1.0 SG B:CYS12 2.6 0.0 1.0 HB3 B:CYS12 3.3 0.0 1.0 CB B:CYS40 3.4 0.0 1.0 HB2 B:CYS40 3.5 0.0 1.0 HB3 B:CYS40 3.5 0.0 1.0 CB B:CYS12 3.6 0.0 1.0 HB2 B:CYS43 3.7 0.0 1.0 H B:CYS43 3.7 0.0 1.0 HB2 B:LYS42 3.8 0.0 1.0 CB B:CYS43 3.8 0.0 1.0 HA B:GLU13 4.0 0.0 1.0 C B:CYS12 4.2 0.0 1.0 O B:CYS12 4.3 0.0 1.0 N B:GLU13 4.3 0.0 1.0 N B:CYS43 4.4 0.0 1.0 HB2 B:CYS12 4.4 0.0 1.0 CA B:CYS12 4.5 0.0 1.0 HB3 B:CYS43 4.6 0.0 1.0 H B:GLU13 4.6 0.0 1.0 CA B:GLU13 4.7 0.0 1.0 CA B:CYS43 4.8 0.0 1.0 HA B:HIS16 4.8 0.0 1.0 CB B:LYS42 4.9 0.0 1.0 CA B:CYS40 4.9 0.0 1.0 HA B:VAL37 4.9 0.0 1.0 H B:LYS42 4.9 0.0 1.0 O B:HIS16 4.9 0.0 1.0 HB2 B:GLU13 5.0 0.0 1.0 HD2 B:LYS42 5.0 0.0 1.0

M.Cai, Y.Huang, M.Caffrey, R.Zheng, R.Craigie, G.M.Clore, A.M.Gronenborn. Solution Structure of the HIS12 --> Cys Mutant of the N-Terminal Zinc Binding Domain of Hiv-1 Integrase Complexed to Cadmium. Protein Sci. V. 7 2669 1998.
ISSN: ISSN 0961-8368
PubMed: 9865962