Cadmium in PDB 1z16: Crystal Structure Analysis of Periplasmic Leu/Ile/Val-Binding Protein with Bound Leucine

The structure of Crystal Structure Analysis of Periplasmic Leu/Ile/Val-Binding Protein with Bound Leucine, PDB code: 1z16 was solved by S.D.Trakhanov, N.K.Vyas, D.M.Kristensen, J.Ma, F.A.Quiocho, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.20 / 1.72
Space group	P 64
Cell size a, b, c (Å), α, β, γ (°)	87.650, 87.650, 94.040, 90.00, 90.00, 120.00
R / Rfree (%)	17.5 / 21

The binding sites of Cadmium atom in the Crystal Structure Analysis of Periplasmic Leu/Ile/Val-Binding Protein with Bound Leucine (pdb code 1z16). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Crystal Structure Analysis of Periplasmic Leu/Ile/Val-Binding Protein with Bound Leucine, PDB code: 1z16:

Cadmium binding site 1 out of 1 in the Crystal Structure Analysis of Periplasmic Leu/Ile/Val-Binding Protein with Bound Leucine


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure Analysis of Periplasmic Leu/Ile/Val-Binding Protein with Bound Leucine within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd800 b:14.8 occ:1.00 OE1 A:GLU152 2.4 12.5 1.0 OE2 A:GLU152 2.4 12.8 1.0 O A:LYS147 2.4 11.4 1.0 CD A:GLU152 2.7 11.5 1.0 C A:LYS147 3.3 13.5 1.0 CA A:LYS147 3.9 13.2 1.0 CB A:LYS147 4.2 16.2 1.0 N A:GLN148 4.2 12.5 1.0 CG A:GLU152 4.3 12.6 1.0 CA A:GLN148 4.4 13.0 1.0 C A:GLN148 4.7 13.4 1.0

S.D.Trakhanov, N.K.Vyas, H.Luecke, D.M.Kristensen, J.Ma, F.A.Quiocho. Ligand-Free and -Bound Structures of the Binding Protein (Livj) of the Escherichia Coli Abc Leucine/Isoleucine/Valine Transport System: Trajectory and Dynamics of the Interdomain Rotation and Ligand Specificity. Biochemistry V. 44 6597 2005.
ISSN: ISSN 0006-2960
PubMed: 15850393
DOI: 10.1021/BI047302O