Cadmium in PDB 2ht0: Ihf Bound to Doubly Nicked Dna

The structure of Ihf Bound to Doubly Nicked Dna, PDB code: 2ht0 was solved by K.K.Swinger, P.A.Rice, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.81 / 2.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	46.942, 58.944, 181.676, 90.00, 90.00, 90.00
R / Rfree (%)	23.5 / 27.8

The binding sites of Cadmium atom in the Ihf Bound to Doubly Nicked Dna (pdb code 2ht0). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Ihf Bound to Doubly Nicked Dna, PDB code: 2ht0:

Cadmium binding site 1 out of 1 in the Ihf Bound to Doubly Nicked Dna


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Ihf Bound to Doubly Nicked Dna within 5.0Å range: probe atom residue distance (Å) B Occ F:Cd401 b:59.4 occ:0.50 N7 F:DG30 2.2 52.8 1.0 O D:HOH48 2.4 64.0 1.0 O F:HOH426 2.6 48.8 1.0 O D:HOH47 2.9 76.5 1.0 C5 F:DG30 3.2 51.9 1.0 C8 F:DG30 3.2 53.5 1.0 O6 F:DG30 3.4 52.0 1.0 C6 F:DG30 3.6 51.2 1.0 O F:HOH425 4.0 53.8 1.0 N9 F:DG30 4.4 55.2 1.0 C4 F:DG30 4.4 52.2 1.0 N4 F:DC31 4.6 49.1 1.0 O D:HOH46 4.7 63.9 1.0

K.K.Swinger, P.A.Rice. Structure-Based Analysis of Hu-Dna Binding. J.Mol.Biol. V. 365 1005 2007.
ISSN: ISSN 0022-2836
PubMed: 17097674
DOI: 10.1016/J.JMB.2006.10.024