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Cadmium in PDB 2jsc: uc(Nmr) Structure of the Cadmium Metal-Sensor Cmtr From Mycobacterium Tuberculosis

Cadmium Binding Sites:

The binding sites of Cadmium atom in the uc(Nmr) Structure of the Cadmium Metal-Sensor Cmtr From Mycobacterium Tuberculosis (pdb code 2jsc). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 2 binding sites of Cadmium where determined in the uc(Nmr) Structure of the Cadmium Metal-Sensor Cmtr From Mycobacterium Tuberculosis, PDB code: 2jsc:
Jump to Cadmium binding site number: 1; 2;

Cadmium binding site 1 out of 2 in 2jsc

Go back to Cadmium Binding Sites List in 2jsc
Cadmium binding site 1 out of 2 in the uc(Nmr) Structure of the Cadmium Metal-Sensor Cmtr From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of uc(Nmr) Structure of the Cadmium Metal-Sensor Cmtr From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd107

b:0.0
occ:1.00
SG A:CYS61 2.3 0.0 1.0
SG A:CYS57 2.4 0.0 1.0
SG B:CYS102 2.4 0.0 1.0
O A:CYS57 2.6 0.0 1.0
H B:VAL103 2.8 0.0 1.0
H A:CYS61 3.1 0.0 1.0
HA A:CYS57 3.1 0.0 1.0
C A:CYS57 3.2 0.0 1.0
HA B:CYS102 3.3 0.0 1.0
HB2 A:CYS61 3.3 0.0 1.0
CB A:CYS61 3.4 0.0 1.0
CA A:CYS57 3.4 0.0 1.0
CB A:CYS57 3.5 0.0 1.0
N A:CYS61 3.6 0.0 1.0
N B:VAL103 3.7 0.0 1.0
CB B:CYS102 3.8 0.0 1.0
CA B:CYS102 4.0 0.0 1.0
CA A:CYS61 4.0 0.0 1.0
HD3 A:ARG13 4.0 0.0 1.0
HH11 A:ARG13 4.1 0.0 1.0
HA A:CYS61 4.1 0.0 1.0
HA B:VAL103 4.2 0.0 1.0
HB2 A:CYS57 4.2 0.0 1.0
HA3 A:GLY60 4.2 0.0 1.0
HB1 A:ALA17 4.3 0.0 1.0
HB2 B:CYS102 4.3 0.0 1.0
HB3 A:CYS57 4.3 0.0 1.0
C A:GLY60 4.3 0.0 1.0
N A:LEU58 4.3 0.0 1.0
HB3 A:CYS61 4.3 0.0 1.0
C B:CYS102 4.4 0.0 1.0
H A:GLY60 4.4 0.0 1.0
CA B:VAL103 4.6 0.0 1.0
HA A:LEU58 4.6 0.0 1.0
HH11 A:ARG23 4.6 0.0 1.0
HB3 B:CYS102 4.6 0.0 1.0
CA A:GLY60 4.7 0.0 1.0
NH1 A:ARG13 4.8 0.0 1.0
HB3 A:ARG13 4.8 0.0 1.0
N A:CYS57 4.9 0.0 1.0
N A:GLY60 4.9 0.0 1.0
H A:LEU58 5.0 0.0 1.0
HH12 A:ARG13 5.0 0.0 1.0
CA A:LEU58 5.0 0.0 1.0

Cadmium binding site 2 out of 2 in 2jsc

Go back to Cadmium Binding Sites List in 2jsc
Cadmium binding site 2 out of 2 in the uc(Nmr) Structure of the Cadmium Metal-Sensor Cmtr From Mycobacterium Tuberculosis


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of uc(Nmr) Structure of the Cadmium Metal-Sensor Cmtr From Mycobacterium Tuberculosis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cd107

b:0.0
occ:1.00
SG B:CYS61 2.3 0.0 1.0
O B:CYS57 2.3 0.0 1.0
SG B:CYS57 2.4 0.0 1.0
SG A:CYS102 2.4 0.0 1.0
H A:VAL103 2.9 0.0 1.0
HA B:CYS57 3.0 0.0 1.0
H B:CYS61 3.0 0.0 1.0
C B:CYS57 3.0 0.0 1.0
HA A:CYS102 3.3 0.0 1.0
CA B:CYS57 3.3 0.0 1.0
HB2 B:CYS61 3.3 0.0 1.0
CB B:CYS61 3.4 0.0 1.0
CB B:CYS57 3.5 0.0 1.0
N B:CYS61 3.5 0.0 1.0
HH11 B:ARG13 3.6 0.0 1.0
CB A:CYS102 3.7 0.0 1.0
N A:VAL103 3.7 0.0 1.0
CA A:CYS102 3.9 0.0 1.0
CA B:CYS61 4.0 0.0 1.0
HA3 B:GLY60 4.0 0.0 1.0
HA B:CYS61 4.1 0.0 1.0
N B:LEU58 4.2 0.0 1.0
HB3 B:CYS57 4.2 0.0 1.0
HB2 B:CYS57 4.2 0.0 1.0
HD3 B:ARG13 4.2 0.0 1.0
H B:GLY60 4.2 0.0 1.0
HB2 A:CYS102 4.2 0.0 1.0
C B:GLY60 4.2 0.0 1.0
HA A:VAL103 4.3 0.0 1.0
NH1 B:ARG13 4.3 0.0 1.0
HB3 B:CYS61 4.3 0.0 1.0
HH12 B:ARG13 4.3 0.0 1.0
C A:CYS102 4.4 0.0 1.0
HA B:LEU58 4.4 0.0 1.0
HB1 B:ALA17 4.4 0.0 1.0
CA B:GLY60 4.6 0.0 1.0
HB3 A:CYS102 4.6 0.0 1.0
HH11 B:ARG23 4.6 0.0 1.0
CA A:VAL103 4.6 0.0 1.0
N B:CYS57 4.8 0.0 1.0
N B:GLY60 4.8 0.0 1.0
CA B:LEU58 4.8 0.0 1.0
H B:LEU58 4.8 0.0 1.0

Reference:

L.Banci, I.Bertini, F.Cantini, S.Ciofi-Baffoni, J.S.Cavet, C.Dennison, A.I.Graham, D.R.Harvie, N.J.Robinson. uc(Nmr) Structural Analysis of Cadmium Sensing By Winged Helix Repressor Cmtr. J.Biol.Chem. V. 282 30181 2007.
ISSN: ISSN 0021-9258
PubMed: 17599915
DOI: 10.1074/JBC.M701119200
Page generated: Fri Aug 28 13:00:15 2020
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