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Cadmium in PDB 2l1o: Zinc to Cadmium Replacement in the A. Thaliana Superman CYS2HIS2 Zinc Finger Induces Structural Rearrangements of Typical Dna Base Determinant Positions

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Zinc to Cadmium Replacement in the A. Thaliana Superman CYS2HIS2 Zinc Finger Induces Structural Rearrangements of Typical Dna Base Determinant Positions (pdb code 2l1o). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Zinc to Cadmium Replacement in the A. Thaliana Superman CYS2HIS2 Zinc Finger Induces Structural Rearrangements of Typical Dna Base Determinant Positions, PDB code: 2l1o:

Cadmium binding site 1 out of 1 in 2l1o

Go back to Cadmium Binding Sites List in 2l1o
Cadmium binding site 1 out of 1 in the Zinc to Cadmium Replacement in the A. Thaliana Superman CYS2HIS2 Zinc Finger Induces Structural Rearrangements of Typical Dna Base Determinant Positions


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Zinc to Cadmium Replacement in the A. Thaliana Superman CYS2HIS2 Zinc Finger Induces Structural Rearrangements of Typical Dna Base Determinant Positions within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd39

b:0.3
occ:1.00
HD2 A:HIS24 2.0 0.0 1.0
NE2 A:HIS24 2.1 0.0 1.0
CD2 A:HIS24 2.2 0.0 1.0
HE1 A:HIS28 2.4 0.0 1.0
HB3 A:CYS8 2.5 0.0 1.0
HB2 A:CYS8 2.5 0.0 1.0
SG A:CYS11 2.5 0.0 1.0
NE2 A:HIS28 2.6 0.0 1.0
CB A:CYS8 2.7 0.0 1.0
CE1 A:HIS28 2.7 0.0 1.0
SG A:CYS8 2.8 0.0 1.0
HZ A:PHE15 3.3 0.0 1.0
CE1 A:HIS24 3.3 0.0 1.0
CG A:HIS24 3.4 0.0 1.0
HE1 A:PHE15 3.4 0.0 1.0
HB3 A:CYS11 3.5 0.0 1.0
CB A:CYS11 3.7 0.0 1.0
H A:CYS11 3.7 0.0 1.0
CD2 A:HIS28 3.8 0.0 1.0
CZ A:PHE15 3.9 0.0 1.0
ND1 A:HIS24 3.9 0.0 1.0
CE1 A:PHE15 4.0 0.0 1.0
HA A:MET25 4.0 0.0 1.0
ND1 A:HIS28 4.0 0.0 1.0
HE1 A:HIS24 4.0 0.0 1.0
CA A:CYS8 4.2 0.0 1.0
O A:HIS24 4.2 0.0 1.0
N A:CYS11 4.4 0.0 1.0
C A:HIS24 4.5 0.0 1.0
HB2 A:CYS11 4.5 0.0 1.0
HD2 A:HIS28 4.5 0.0 1.0
HB3 A:HIS24 4.5 0.0 1.0
HB3 A:PHE10 4.5 0.0 1.0
CB A:HIS24 4.5 0.0 1.0
CG A:HIS28 4.6 0.0 1.0
N A:MET25 4.6 0.0 1.0
CA A:CYS11 4.6 0.0 1.0
HA A:CYS8 4.7 0.0 1.0
H A:CYS8 4.7 0.0 1.0
HD1 A:HIS28 4.8 0.0 1.0
CA A:MET25 4.8 0.0 1.0
H A:MET25 4.9 0.0 1.0
HB2 A:PHE10 4.9 0.0 1.0
HD1 A:HIS24 4.9 0.0 1.0
N A:CYS8 4.9 0.0 1.0
C A:CYS8 4.9 0.0 1.0
HG3 A:MET25 5.0 0.0 1.0
HB2 A:ARG13 5.0 0.0 1.0

Reference:

G.Malgieri, L.Zaccaro, M.Leone, E.Bucci, S.Esposito, I.Baglivo, A.Del Gatto, L.Russo, R.Scandurra, P.V.Pedone, R.Fattorusso, C.Isernia. Zinc to Cadmium Replacement in the A. Thaliana Superman Cys(2) His(2) Zinc Finger Induces Structural Rearrangements of Typical Dna Base Determinant Positions. Biopolymers V. 95 801 2011.
ISSN: ISSN 0006-3525
PubMed: 21618209
DOI: 10.1002/BIP.21680
Page generated: Sat Dec 12 08:17:27 2020

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