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Cadmium in PDB 2l61: Protein and Metal Cluster Structure of the Wheat Metallothionein Domain G-Ec-1. the Second Part of the Puzzle.

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Protein and Metal Cluster Structure of the Wheat Metallothionein Domain G-Ec-1. the Second Part of the Puzzle. (pdb code 2l61). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 2 binding sites of Cadmium where determined in the Protein and Metal Cluster Structure of the Wheat Metallothionein Domain G-Ec-1. the Second Part of the Puzzle., PDB code: 2l61:
Jump to Cadmium binding site number: 1; 2;

Cadmium binding site 1 out of 2 in 2l61

Go back to Cadmium Binding Sites List in 2l61
Cadmium binding site 1 out of 2 in the Protein and Metal Cluster Structure of the Wheat Metallothionein Domain G-Ec-1. the Second Part of the Puzzle.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Protein and Metal Cluster Structure of the Wheat Metallothionein Domain G-Ec-1. the Second Part of the Puzzle. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd100

b:21.2
occ:1.00
SG A:CYS14 2.5 23.3 1.0
SG A:CYS10 2.5 24.2 1.0
SG A:CYS22 2.5 3.4 1.0
SG A:CYS20 2.5 0.4 1.0
CD A:CD120 3.1 3.4 1.0
HB3 A:CYS20 3.4 43.4 1.0
CB A:CYS20 3.6 21.1 1.0
HD2 A:PRO15 3.7 14.4 1.0
HB3 A:CYS14 3.8 22.3 1.0
CB A:CYS14 3.8 15.2 1.0
CB A:CYS10 4.0 52.5 1.0
HB2 A:CYS20 4.0 64.4 1.0
HB2 A:CYS10 4.0 52.1 1.0
SG A:CYS4 4.1 34.4 1.0
HA A:CYS14 4.2 32.3 1.0
CB A:CYS22 4.2 51.2 1.0
O A:ALA11 4.2 41.3 1.0
HB2 A:CYS4 4.2 62.1 1.0
HB3 A:CYS10 4.3 14.1 1.0
H A:CYS22 4.4 63.3 1.0
HB2 A:CYS22 4.4 24.1 1.0
HB2 A:CYS14 4.6 33.2 1.0
CA A:CYS14 4.6 25.2 1.0
CD A:PRO15 4.6 20.2 1.0
HD3 A:PRO15 4.7 75.4 1.0
CB A:CYS4 4.7 11.5 1.0
HA A:CYS22 4.8 74.1 1.0
HB3 A:CYS22 4.9 32.1 1.0
CA A:CYS22 4.9 3.3 1.0
HB3 A:CYS4 4.9 44.1 1.0
N A:CYS22 4.9 40.4 1.0
CA A:CYS20 5.0 75.1 1.0

Cadmium binding site 2 out of 2 in 2l61

Go back to Cadmium Binding Sites List in 2l61
Cadmium binding site 2 out of 2 in the Protein and Metal Cluster Structure of the Wheat Metallothionein Domain G-Ec-1. the Second Part of the Puzzle.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Protein and Metal Cluster Structure of the Wheat Metallothionein Domain G-Ec-1. the Second Part of the Puzzle. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd120

b:3.4
occ:1.00
SG A:CYS8 2.4 22.2 1.0
SG A:CYS22 2.5 3.4 1.0
SG A:CYS4 2.5 34.4 1.0
SG A:CYS10 2.7 24.2 1.0
CD A:CD100 3.1 21.2 1.0
HB3 A:CYS8 3.1 13.4 1.0
CB A:CYS8 3.2 15.1 1.0
HB2 A:CYS8 3.3 61.2 1.0
HB2 A:CYS4 3.9 62.1 1.0
HA A:CYS22 3.9 74.1 1.0
CB A:CYS22 3.9 51.2 1.0
CB A:CYS4 3.9 11.5 1.0
HB3 A:CYS22 4.0 32.1 1.0
CB A:CYS10 4.1 52.5 1.0
HB3 A:CYS10 4.1 14.1 1.0
SG A:CYS14 4.2 23.3 1.0
H A:ASP5 4.3 44.1 1.0
CA A:CYS22 4.4 3.3 1.0
O A:ASP5 4.5 22.1 1.0
H A:CYS10 4.5 62.1 1.0
HB3 A:CYS4 4.6 44.1 1.0
CA A:CYS8 4.7 52.3 1.0
HA A:CYS4 4.7 23.2 1.0
O A:ALA11 4.7 41.3 1.0
HB2 A:CYS22 4.8 24.1 1.0
O A:CYS10 4.8 72.3 1.0
HB2 A:CYS10 4.9 52.1 1.0
CA A:CYS4 4.9 33.3 1.0
N A:CYS10 4.9 63.5 1.0
CA A:CYS10 5.0 64.2 1.0

Reference:

J.Loebus, E.A.Peroza, N.Bluthgen, T.Fox, W.Meyer-Klaucke, O.Zerbe, E.Freisinger. Protein and Metal Cluster Structure of the Wheat Metallothionein Domain Gamma-E(C)-1: the Second Part of the Puzzle. J.Biol.Inorg.Chem. V. 16 683 2011.
ISSN: ISSN 0949-8257
PubMed: 21437709
DOI: 10.1007/S00775-011-0770-2
Page generated: Sat Dec 12 08:17:27 2020

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