Cadmium in PDB 2lk6: uc(Nmr) Determination of the Global Structure of the Cd-113 Derivative of Desulforedoxin

The binding sites of Cadmium atom in the uc(Nmr) Determination of the Global Structure of the Cd-113 Derivative of Desulforedoxin (pdb code 2lk6). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 2 binding sites of Cadmium where determined in the uc(Nmr) Determination of the Global Structure of the Cd-113 Derivative of Desulforedoxin, PDB code: 2lk6:
Jump to Cadmium binding site number: 1; 2;

Cadmium binding site 1 out of 2 in the uc(Nmr) Determination of the Global Structure of the Cd-113 Derivative of Desulforedoxin


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of uc(Nmr) Determination of the Global Structure of the Cd-113 Derivative of Desulforedoxin within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd37 b:0.0 occ:1.00 SG A:CYS12 2.4 0.0 1.0 SG A:CYS29 2.4 0.0 1.0 SG A:CYS28 2.5 0.0 1.0 SG A:CYS9 2.6 0.0 1.0 HA3 B:GLY24 2.9 0.0 1.0 H A:CYS12 3.0 0.0 1.0 HB2 A:CYS29 3.1 0.0 1.0 HB3 A:CYS28 3.3 0.0 1.0 CB A:CYS29 3.3 0.0 1.0 HB3 A:CYS12 3.4 0.0 1.0 CB A:CYS28 3.4 0.0 1.0 HB3 A:CYS9 3.5 0.0 1.0 CB A:CYS12 3.5 0.0 1.0 CB A:CYS9 3.6 0.0 1.0 HB2 A:CYS9 3.6 0.0 1.0 N A:CYS29 3.7 0.0 1.0 C A:CYS28 3.7 0.0 1.0 HB3 A:LEU11 3.7 0.0 1.0 HB2 A:LEU11 3.8 0.0 1.0 N A:CYS12 3.8 0.0 1.0 CA B:GLY24 3.9 0.0 1.0 H A:CYS29 3.9 0.0 1.0 O A:CYS28 4.0 0.0 1.0 CA A:CYS29 4.1 0.0 1.0 CA A:CYS28 4.1 0.0 1.0 H A:GLY13 4.2 0.0 1.0 N B:GLY24 4.2 0.0 1.0 HB3 A:CYS29 4.2 0.0 1.0 H B:GLY23 4.2 0.0 1.0 CB A:LEU11 4.3 0.0 1.0 CA A:CYS12 4.3 0.0 1.0 HB3 A:GLN14 4.3 0.0 1.0 HB2 A:CYS28 4.4 0.0 1.0 H A:GLN14 4.4 0.0 1.0 HB2 A:CYS12 4.4 0.0 1.0 HA A:CYS29 4.5 0.0 1.0 H B:GLY24 4.5 0.0 1.0 HA2 B:GLY24 4.5 0.0 1.0 H A:LEU11 4.5 0.0 1.0 HE21 A:GLN14 4.6 0.0 1.0 H B:THR25 4.6 0.0 1.0 C B:GLY23 4.6 0.0 1.0 HA A:CYS28 4.6 0.0 1.0 O B:GLY23 4.7 0.0 1.0 C B:GLY24 4.7 0.0 1.0 HD11 A:LEU11 4.8 0.0 1.0 HB2 A:GLN14 4.9 0.0 1.0 C A:LEU11 4.9 0.0 1.0 N B:THR25 4.9 0.0 1.0 N A:GLY13 5.0 0.0 1.0 CA A:LEU11 5.0 0.0 1.0

Cadmium binding site 2 out of 2 in the uc(Nmr) Determination of the Global Structure of the Cd-113 Derivative of Desulforedoxin


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of uc(Nmr) Determination of the Global Structure of the Cd-113 Derivative of Desulforedoxin within 5.0Å range: probe atom residue distance (Å) B Occ B:Cd37 b:0.0 occ:1.00 SG B:CYS12 2.4 0.0 1.0 SG B:CYS29 2.5 0.0 1.0 SG B:CYS28 2.5 0.0 1.0 SG B:CYS9 2.6 0.0 1.0 HA3 A:GLY24 2.7 0.0 1.0 H B:CYS12 3.0 0.0 1.0 HB2 B:CYS29 3.1 0.0 1.0 HB3 B:CYS28 3.2 0.0 1.0 CB B:CYS29 3.3 0.0 1.0 CB B:CYS28 3.4 0.0 1.0 HB3 B:CYS12 3.5 0.0 1.0 HB3 B:CYS9 3.5 0.0 1.0 CB B:CYS9 3.6 0.0 1.0 HB2 B:CYS9 3.6 0.0 1.0 CB B:CYS12 3.6 0.0 1.0 HB2 B:LEU11 3.6 0.0 1.0 N B:CYS29 3.6 0.0 1.0 C B:CYS28 3.7 0.0 1.0 CA A:GLY24 3.8 0.0 1.0 H B:CYS29 3.8 0.0 1.0 N B:CYS12 3.9 0.0 1.0 HB3 B:LEU11 4.0 0.0 1.0 CA B:CYS29 4.0 0.0 1.0 O B:CYS28 4.0 0.0 1.0 CA B:CYS28 4.1 0.0 1.0 HA2 A:GLY24 4.2 0.0 1.0 H B:GLY13 4.2 0.0 1.0 HB3 B:GLN14 4.3 0.0 1.0 HB3 B:CYS29 4.3 0.0 1.0 HB2 B:CYS28 4.3 0.0 1.0 CB B:LEU11 4.3 0.0 1.0 H A:THR25 4.4 0.0 1.0 H B:GLN14 4.4 0.0 1.0 CA B:CYS12 4.4 0.0 1.0 HA B:CYS29 4.4 0.0 1.0 N A:GLY24 4.5 0.0 1.0 HB2 B:CYS12 4.5 0.0 1.0 HA B:CYS28 4.5 0.0 1.0 H B:LEU11 4.5 0.0 1.0 HE21 B:GLN14 4.5 0.0 1.0 O A:GLY23 4.6 0.0 1.0 C A:GLY24 4.7 0.0 1.0 HB2 B:GLN14 4.8 0.0 1.0 C A:GLY23 4.8 0.0 1.0 N A:THR25 4.8 0.0 1.0 HE3 B:MET33 4.8 0.0 1.0 HE2 B:MET33 4.9 0.0 1.0 C B:LEU11 4.9 0.0 1.0 N B:GLY13 5.0 0.0 1.0 H A:GLY24 5.0 0.0 1.0

B.J.Goodfellow, F.Rusnak, I.Moura, T.Domke, J.J.Moura. uc(Nmr) Determination of the Global Structure of the 113CD Derivative of Desulforedoxin: Investigation of the Hydrogen Bonding Pattern at the Metal Center. Protein Sci. V. 7 928 1998.
ISSN: ISSN 0961-8368
PubMed: 9568899
DOI: 10.1002/PRO.5560070410