Atomistry » Cadmium » PDB 1ykq-2eik » 2mhu
Atomistry »
  Cadmium »
    PDB 1ykq-2eik »
      2mhu »

Cadmium in PDB 2mhu: The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy

Cadmium Binding Sites:

The binding sites of Cadmium atom in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy (pdb code 2mhu). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 3 binding sites of Cadmium where determined in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy, PDB code: 2mhu:
Jump to Cadmium binding site number: 1; 2; 3;

Cadmium binding site 1 out of 3 in 2mhu

Go back to Cadmium Binding Sites List in 2mhu
Cadmium binding site 1 out of 3 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd102

b:1.0
occ:1.00
SG A:CYS15 2.4 1.2 1.0
SG A:CYS19 2.6 1.4 1.0
SG A:CYS29 2.6 1.9 1.0
SG A:CYS24 2.6 0.8 1.0
HB2 A:CYS19 3.0 2.0 1.0
HB3 A:CYS15 3.0 1.8 1.0
HB3 A:CYS29 3.1 2.7 1.0
HB2 A:CYS24 3.3 0.5 1.0
CB A:CYS15 3.3 1.5 1.0
CB A:CYS24 3.4 0.6 1.0
CB A:CYS29 3.4 2.0 1.0
CB A:CYS19 3.4 1.4 1.0
HB3 A:CYS24 3.4 0.8 1.0
HB2 A:CYS26 3.5 3.9 1.0
HB3 A:CYS21 3.5 1.2 1.0
HB2 A:CYS29 3.7 2.8 1.0
HA A:CYS19 4.0 1.2 1.0
HB2 A:CYS15 4.0 1.9 1.0
CD A:CD103 4.1 1.3 1.0
HB3 A:CYS19 4.2 1.8 1.0
HA A:CYS15 4.3 1.6 1.0
CA A:CYS19 4.3 0.8 1.0
HB2 A:CYS21 4.4 1.1 1.0
O A:CYS29 4.4 2.2 1.0
CB A:CYS21 4.4 0.9 1.0
CA A:CYS15 4.5 1.4 1.0
CD A:CD104 4.5 0.9 1.0
CB A:CYS26 4.6 2.5 1.0
CA A:CYS29 4.8 2.2 1.0
H A:CYS26 4.8 1.2 1.0
HB3 A:CYS26 4.8 3.8 1.0
H A:CYS21 4.8 1.2 1.0
CA A:CYS24 4.8 0.6 1.0

Cadmium binding site 2 out of 3 in 2mhu

Go back to Cadmium Binding Sites List in 2mhu
Cadmium binding site 2 out of 3 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd103

b:1.3
occ:1.00
SG A:CYS15 2.6 1.2 1.0
SG A:CYS13 2.6 2.2 1.0
SG A:CYS26 2.6 1.3 1.0
HB3 A:CYS7 2.7 3.1 1.0
SG A:CYS7 2.8 1.2 1.0
HB2 A:CYS15 3.0 1.9 1.0
HB2 A:CYS13 3.2 2.0 1.0
CB A:CYS7 3.2 2.1 1.0
HB2 A:CYS26 3.2 3.9 1.0
CB A:CYS15 3.3 1.5 1.0
CB A:CYS13 3.4 1.4 1.0
CB A:CYS26 3.4 2.5 1.0
HA A:CYS13 3.4 2.6 1.0
HB2 A:CYS7 3.5 2.8 1.0
H A:CYS15 3.6 1.1 1.0
HB3 A:CYS26 3.6 3.8 1.0
CA A:CYS13 3.9 1.7 1.0
HB3 A:CYS15 4.0 1.8 1.0
SG A:CYS24 4.1 0.8 1.0
CD A:CD102 4.1 1.0 1.0
CD A:CD104 4.3 0.9 1.0
N A:CYS15 4.3 1.1 1.0
C A:CYS13 4.3 1.5 1.0
HB2 A:CYS29 4.3 2.8 1.0
HB3 A:CYS13 4.4 2.0 1.0
HB3 A:CYS29 4.4 2.7 1.0
CA A:CYS15 4.4 1.4 1.0
CA A:CYS7 4.6 2.0 1.0
HA A:CYS7 4.7 2.3 1.0
O A:CYS13 4.7 1.9 1.0
H A:CYS26 4.7 1.2 1.0
N A:THR14 4.8 1.8 1.0
CA A:CYS26 4.8 2.0 1.0
H A:THR14 4.9 2.5 1.0
CB A:CYS29 4.9 2.0 1.0
HA A:CYS15 5.0 1.6 1.0

Cadmium binding site 3 out of 3 in 2mhu

Go back to Cadmium Binding Sites List in 2mhu
Cadmium binding site 3 out of 3 in the The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of The Three-Dimensional Structure of Human [113CD7] Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd104

b:0.9
occ:1.00
HA A:CYS24 2.5 0.6 1.0
SG A:CYS21 2.6 1.0 1.0
SG A:CYS5 2.6 1.2 1.0
SG A:CYS24 2.6 0.8 1.0
SG A:CYS7 2.7 1.2 1.0
HB2 A:CYS7 3.0 2.8 1.0
H A:CYS7 3.2 1.4 1.0
HA A:CYS5 3.2 1.3 1.0
CB A:CYS24 3.2 0.6 1.0
H A:LYS25 3.2 1.1 1.0
HB2 A:CYS21 3.2 1.1 1.0
HB2 A:CYS24 3.2 0.5 1.0
HB2 A:CYS5 3.3 1.2 1.0
CA A:CYS24 3.3 0.6 1.0
CB A:CYS21 3.3 0.9 1.0
HB3 A:CYS21 3.4 1.2 1.0
CB A:CYS7 3.4 2.1 1.0
CB A:CYS5 3.4 1.3 1.0
H A:CYS26 3.7 1.2 1.0
CA A:CYS5 3.7 1.4 1.0
H A:SER6 3.9 1.4 1.0
N A:CYS7 4.0 1.6 1.0
N A:LYS25 4.0 1.1 1.0
HB3 A:CYS7 4.2 3.1 1.0
C A:CYS24 4.2 0.9 1.0
CD A:CD103 4.3 1.3 1.0
N A:SER6 4.3 1.4 1.0
HB3 A:CYS24 4.3 0.8 1.0
CA A:CYS7 4.3 2.0 1.0
C A:CYS5 4.3 1.4 1.0
HB2 A:CYS26 4.3 3.9 1.0
N A:CYS24 4.3 0.7 1.0
HB3 A:CYS5 4.4 1.4 1.0
SG A:CYS15 4.5 1.2 1.0
CD A:CD102 4.5 1.0 1.0
SG A:CYS26 4.5 1.3 1.0
H A:CYS24 4.6 0.8 1.0
N A:CYS26 4.7 1.5 1.0
CA A:CYS21 4.8 1.1 1.0
O A:ASN4 4.8 2.3 1.0
CB A:CYS26 4.9 2.5 1.0
HG A:SER6 4.9 3.7 1.0
HA A:CYS7 5.0 2.3 1.0

Reference:

B.A.Messerle, A.Schaffer, M.Vasak, J.H.Kagi, K.Wuthrich. Three-Dimensional Structure of Human [113CD7]Metallothionein-2 in Solution Determined By Nuclear Magnetic Resonance Spectroscopy. J.Mol.Biol. V. 214 765 1990.
ISSN: ISSN 0022-2836
PubMed: 2388267
DOI: 10.1016/0022-2836(90)90291-S
Page generated: Fri Aug 28 13:00:54 2020
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy