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Cadmium in PDB 2mrb: Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance (pdb code 2mrb). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 3 binding sites of Cadmium where determined in the Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance, PDB code: 2mrb:
Jump to Cadmium binding site number: 1; 2; 3;

Cadmium binding site 1 out of 3 in 2mrb

Go back to Cadmium Binding Sites List in 2mrb
Cadmium binding site 1 out of 3 in the Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd102

b:0.9
occ:1.00
SG A:CYS29 2.5 1.2 1.0
SG A:CYS19 2.5 1.2 1.0
SG A:CYS24 2.5 1.3 1.0
SG A:CYS15 2.6 1.3 1.0
CB A:CYS15 3.3 1.3 1.0
CB A:CYS19 3.3 1.1 1.0
CB A:CYS29 3.4 2.0 1.0
CB A:CYS24 3.4 1.3 1.0
HA A:CYS19 4.0 1.2 1.0
HA A:CYS15 4.1 1.9 1.0
CD A:CD104 4.2 1.4 1.0
CD A:CD103 4.3 1.7 1.0
CA A:CYS19 4.3 1.0 1.0
CA A:CYS15 4.4 1.3 1.0
CB A:CYS26 4.5 1.9 1.0
H A:CYS26 4.5 2.0 1.0
H A:THR20 4.6 1.2 1.0
CA A:CYS29 4.6 2.1 1.0
N A:CYS29 4.8 1.8 1.0
SG A:CYS21 4.8 1.1 1.0
CA A:CYS24 4.9 1.3 1.0
H A:CYS29 5.0 1.9 1.0
O A:CYS29 5.0 2.4 1.0

Cadmium binding site 2 out of 3 in 2mrb

Go back to Cadmium Binding Sites List in 2mrb
Cadmium binding site 2 out of 3 in the Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd103

b:1.7
occ:1.00
SG A:CYS15 2.5 1.3 1.0
SG A:CYS13 2.5 1.9 1.0
SG A:CYS26 2.5 2.0 1.0
SG A:CYS7 2.7 1.9 1.0
CB A:CYS7 3.4 2.4 1.0
CB A:CYS15 3.4 1.3 1.0
CB A:CYS13 3.4 1.8 1.0
CB A:CYS26 3.4 1.9 1.0
CD A:CD104 4.2 1.4 1.0
SG A:CYS24 4.2 1.3 1.0
CD A:CD102 4.3 0.9 1.0
H A:ALA8 4.5 4.4 1.0
CA A:CYS15 4.6 1.3 1.0
H A:CYS15 4.6 1.3 1.0
N A:CYS15 4.6 1.3 1.0
CA A:CYS13 4.7 2.6 1.0
CA A:CYS7 4.7 2.7 1.0
HA A:CYS7 4.8 2.8 1.0
CA A:CYS26 4.9 2.0 1.0
C A:CYS13 4.9 2.6 1.0
H A:THR14 5.0 3.4 1.0

Cadmium binding site 3 out of 3 in 2mrb

Go back to Cadmium Binding Sites List in 2mrb
Cadmium binding site 3 out of 3 in the Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Three-Dimensional Structure of Rabbit Liver Cd-7 Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd104

b:1.4
occ:1.00
SG A:CYS5 2.5 2.0 1.0
SG A:CYS21 2.5 1.1 1.0
SG A:CYS7 2.5 1.9 1.0
SG A:CYS24 2.6 1.3 1.0
HA A:CYS24 3.0 1.3 1.0
CB A:CYS5 3.3 1.7 1.0
HA A:CYS5 3.3 1.2 1.0
CB A:CYS7 3.3 2.4 1.0
CB A:CYS24 3.4 1.3 1.0
CB A:CYS21 3.4 0.8 1.0
H A:CYS7 3.5 2.5 1.0
H A:SER6 3.6 1.9 1.0
CA A:CYS24 3.7 1.3 1.0
H A:LYS25 3.7 1.8 1.0
CA A:CYS5 3.7 1.5 1.0
N A:CYS7 3.9 2.6 1.0
N A:SER6 4.0 2.1 1.0
C A:CYS5 4.2 2.0 1.0
CD A:CD103 4.2 1.7 1.0
CD A:CD102 4.2 0.9 1.0
CA A:CYS7 4.3 2.7 1.0
H A:CYS26 4.3 2.0 1.0
SG A:CYS15 4.3 1.3 1.0
N A:LYS25 4.5 1.9 1.0
SG A:CYS26 4.6 2.0 1.0
H A:CYS21 4.6 1.0 1.0
C A:CYS24 4.7 1.7 1.0
N A:CYS24 4.7 1.2 1.0
C A:SER6 4.7 2.7 1.0
HA A:CYS7 4.8 2.8 1.0
CA A:CYS21 4.9 0.8 1.0

Reference:

A.Arseniev, P.Schultze, E.Worgotter, W.Braun, G.Wagner, M.Vasak, J.H.Kagi, K.Wuthrich. Three-Dimensional Structure of Rabbit Liver [CD7]Metallothionein-2A in Aqueous Solution Determined By Nuclear Magnetic Resonance. J.Mol.Biol. V. 201 637 1988.
ISSN: ISSN 0022-2836
PubMed: 3418714
DOI: 10.1016/0022-2836(88)90644-4
Page generated: Sun Jan 24 09:43:39 2021

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