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Cadmium in PDB 2x21: Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Protein crystallography data
The structure of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A, PDB code: 2x21
was solved by
T.Schulte,
R.G.Hiller,
E.Hofmann,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 43.01 / 1.75 |
| Space group | C 2 2 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 68.490, 81.810, 74.980, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 14.6 / 18.6 |
Other elements in 2x21:
The structure of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
| Potassium | (K) | 4 atoms |
| Chlorine | (Cl) | 7 atoms |
| Sodium | (Na) | 1 atom |
Cadmium Binding Sites:
The binding sites of Cadmium atom in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
(pdb code 2x21). This binding sites where shown within
5.0 Angstroms radius around Cadmium atom.
In total 8 binding sites of Cadmium where determined in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A, PDB code: 2x21:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Cadmium where determined in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A, PDB code: 2x21:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Cadmium binding site 1 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 1 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 1 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Cadmium binding site 2 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 2 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 2 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Cadmium binding site 3 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 3 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 3 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Cadmium binding site 4 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 4 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 4 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Cadmium binding site 5 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 5 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 5 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Cadmium binding site 6 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 6 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 6 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Cadmium binding site 7 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 7 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 7 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Cadmium binding site 8 out of 8 in 2x21
Go back to
Cadmium Binding Sites List in 2x21
Cadmium binding site 8 out
of 8 in the Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 8 of Structure of Peridinin-Chlorophyll-Protein Reconstituted with Bchl-A within 5.0Å range:
|
Reference:
T.Schulte,
R.G.Hiller,
E.Hofmann.
X-Ray Structures of the Peridinin-Chlorophyll-Protein Reconstituted with Different Chlorophylls. Febs Lett. V. 584 973 2010.
ISSN: ISSN 0014-5793
PubMed: 20102711
DOI: 10.1016/J.FEBSLET.2010.01.041
Page generated: Sat Dec 12 08:18:34 2020
ISSN: ISSN 0014-5793
PubMed: 20102711
DOI: 10.1016/J.FEBSLET.2010.01.041
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