Cadmium in the structure of Crystal Structure of Pd(Allyl)/Apo-H114AFR (pdb 2zg9)

The binding sites of Cadmium atom in the structure of Crystal Structure of Pd(Allyl)/Apo-H114AFR (pdb code 2zg9). This binding sites where shown with 5.0 Angstroms radius around Cadmium atom. The 2zg9 structure was solved by S.ABE, J.NIEMEYER, M.ABE, T.UENO, T.HIKAGE, G.ERKER, Y.WATANABE, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 25.1-1.8 Space group F432 a (A) 181.176 b (A) 181.176 c (A) 181.176 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 17.7 Rfree (%) 21.1 Cadmium Binding Sites: Cadmium binding site 1 out of 1 in 2zg9 Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cadmium in the PDB 2zg9. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cadmium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: X: Asp80, X: Hoh234, X: Hoh286, X: Hoh298, conact list: Atom Atom Distance (A) Cd CB X:Asp80 4.22 Cd OD2 X:Asp80 2.22 Cd OD1 X:Asp80 2.50 Cd CG X:Asp80 2.72 Cd O X:Hoh234 4.47 Cd O X:Hoh286 2.01 Cd O X:Hoh298 4.89 interactive model: