Cadmium »
PDB 2wxt-3a05 »
3a05 »
Cadmium in PDB 3a05: Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Enzymatic activity of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
All present enzymatic activity of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan:
6.1.1.2;
6.1.1.2;
Protein crystallography data
The structure of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan, PDB code: 3a05
was solved by
W.Tsuchiya,
Z.Fujimoto,
T.Hasegawa,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.09 / 2.20 |
| Space group | C 2 2 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 98.212, 102.919, 97.645, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 18.9 / 24.4 |
Other elements in 3a05:
The structure of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan also contains other interesting chemical elements:
| Iron | (Fe) | 4 atoms |
Cadmium Binding Sites:
The binding sites of Cadmium atom in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
(pdb code 3a05). This binding sites where shown within
5.0 Angstroms radius around Cadmium atom.
In total 3 binding sites of Cadmium where determined in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan, PDB code: 3a05:
Jump to Cadmium binding site number: 1; 2; 3;
In total 3 binding sites of Cadmium where determined in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan, PDB code: 3a05:
Jump to Cadmium binding site number: 1; 2; 3;
Cadmium binding site 1 out of 3 in 3a05
Go back to
Cadmium Binding Sites List in 3a05
Cadmium binding site 1 out
of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 1 of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan within 5.0Å range:
|
Cadmium binding site 2 out of 3 in 3a05
Go back to
Cadmium Binding Sites List in 3a05
Cadmium binding site 2 out
of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 2 of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan within 5.0Å range:
|
Cadmium binding site 3 out of 3 in 3a05
Go back to
Cadmium Binding Sites List in 3a05
Cadmium binding site 3 out
of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 3 of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan within 5.0Å range:
|
Reference:
W.Tsuchiya,
Z.Fujimoto,
T.Hasegawa.
Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 To Be Published.
Page generated: Thu Jul 10 12:19:15 2025
Last articles
Fe in 2YXOFe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
