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Cadmium in PDB 3a05: Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Enzymatic activity of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
All present enzymatic activity of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan:
6.1.1.2;
6.1.1.2;
Protein crystallography data
The structure of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan, PDB code: 3a05
was solved by
W.Tsuchiya,
Z.Fujimoto,
T.Hasegawa,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.09 / 2.20 |
| Space group | C 2 2 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 98.212, 102.919, 97.645, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 18.9 / 24.4 |
Other elements in 3a05:
The structure of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan also contains other interesting chemical elements:
| Iron | (Fe) | 4 atoms |
Cadmium Binding Sites:
The binding sites of Cadmium atom in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
(pdb code 3a05). This binding sites where shown within
5.0 Angstroms radius around Cadmium atom.
In total 3 binding sites of Cadmium where determined in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan, PDB code: 3a05:
Jump to Cadmium binding site number: 1; 2; 3;
In total 3 binding sites of Cadmium where determined in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan, PDB code: 3a05:
Jump to Cadmium binding site number: 1; 2; 3;
Cadmium binding site 1 out of 3 in 3a05
Go back to
Cadmium Binding Sites List in 3a05
Cadmium binding site 1 out
of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 1 of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan within 5.0Å range:
|
Cadmium binding site 2 out of 3 in 3a05
Go back to
Cadmium Binding Sites List in 3a05
Cadmium binding site 2 out
of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 2 of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan within 5.0Å range:
|
Cadmium binding site 3 out of 3 in 3a05
Go back to
Cadmium Binding Sites List in 3a05
Cadmium binding site 3 out
of 3 in the Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 3 of Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 Complex with Tryptophan within 5.0Å range:
|
Reference:
W.Tsuchiya,
Z.Fujimoto,
T.Hasegawa.
Crystal Structure of Tryptophanyl-Trna Synthetase From Hyperthermophilic Archaeon, Aeropyrum Pernix K1 To Be Published.
Page generated: Wed Oct 28 10:00:50 2020
