Cadmium in the structure of Crystal Structure of Pd(Allyl)/Apo-E45C/R52H-Rhlfr (pdb 3noz)

The binding sites of Cadmium atom in the structure of Crystal Structure of Pd(Allyl)/Apo-E45C/R52H-Rhlfr (pdb code 3noz). This binding sites where shown with 5.0 Angstroms radius around Cadmium atom. The 3noz structure was solved by Z.WANG, T.UENO, S.ABE, Y.TAKEZAWA, H.AOYAGI, T.HIKAGE, Y.WATANABE, S.KITAGAWA, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 19.3-1.5 Space group F432 a (A) 181.427 b (A) 181.427 c (A) 181.427 alpha (°) 90.00 beta (°) 90.00 gamma (°) 90.00 Rfactor (%) 19.6 Rfree (%) 20.9 Cadmium Binding Sites: Cadmium binding site 1 out of 1 in 3noz Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Cadmium in the PDB 3noz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Cadmium atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: X: Asp80, X: Hoh221, conact list: Atom Atom Distance (A) Cd CB X:Asp80 4.22 Cd OD2 X:Asp80 2.29 Cd OD1 X:Asp80 2.54 Cd CG X:Asp80 2.75 Cd O X:Hoh221 4.58 interactive model: