Cadmium in PDB 4o5q: Crystal Structure of the Alkylhydroperoxide Reductase Ahpf From Escherichia Coli

The structure of Crystal Structure of the Alkylhydroperoxide Reductase Ahpf From Escherichia Coli, PDB code: 4o5q was solved by P.V.Dip, N.Kamariah, M.S.S.Manimekalai, A.M.Balakrishna, G.Gruber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	26.62 / 2.00
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	106.494, 58.696, 123.994, 90.00, 114.58, 90.00
R / Rfree (%)	14.1 / 18.8

The binding sites of Cadmium atom in the Crystal Structure of the Alkylhydroperoxide Reductase Ahpf From Escherichia Coli (pdb code 4o5q). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Crystal Structure of the Alkylhydroperoxide Reductase Ahpf From Escherichia Coli, PDB code: 4o5q:

Cadmium binding site 1 out of 1 in the Crystal Structure of the Alkylhydroperoxide Reductase Ahpf From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of the Alkylhydroperoxide Reductase Ahpf From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd614 b:43.9 occ:0.88 HE2 A:HIS114 1.8 83.5 1.0 OE2 A:GLU110 2.3 55.6 1.0 O A:HOH1046 2.4 42.4 1.0 OE1 A:GLU110 2.5 48.9 1.0 NE2 A:HIS114 2.6 69.6 1.0 CD A:GLU110 2.7 55.9 1.0 HD2 A:ARG113 3.3 70.0 1.0 CE1 A:HIS114 3.4 76.4 1.0 HE1 A:HIS114 3.4 91.7 1.0 CD2 A:HIS114 3.7 71.3 1.0 HD2 A:HIS114 3.9 85.6 1.0 HD3 A:ARG113 4.0 70.0 1.0 CD A:ARG113 4.1 58.3 1.0 CG A:GLU110 4.3 46.9 1.0 HG2 A:GLU110 4.6 56.3 1.0 HG3 A:GLU110 4.6 56.3 1.0 ND1 A:HIS114 4.6 81.9 1.0 HA A:GLU110 4.8 56.0 1.0 CG A:HIS114 4.8 70.2 1.0 HB3 A:ARG113 4.8 65.5 1.0 NE A:ARG113 4.9 55.4 1.0 HB2 A:GLU110 4.9 58.6 1.0 HE A:ARG113 4.9 66.4 1.0

P.V.Dip, N.Kamariah, M.S.S.Manimekalai, W.Nartey, A.M.Balakrishna, F.Eisenhaber, B.Eisenhaber, G.Gruber. Structure, Mechanism and Ensemble Formation of the Alkylhydroperoxide Reductase Subunits Ahpc and Ahpf From Escherichia Coli Acta Crystallogr.,Sect.D V. 70 2848 2014.
ISSN: ISSN 0907-4449
DOI: 10.1107/S1399004714019233