Cadmium in PDB 5f53: Nano-Ring of Cadmium Ions Coordinated By NVPIZZA2-S16S58

The structure of Nano-Ring of Cadmium Ions Coordinated By NVPIZZA2-S16S58, PDB code: 5f53 was solved by A.R.D.Voet, J.R.H.Tame, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.00 / 1.80
Space group	I 41 3 2
Cell size a, b, c (Å), α, β, γ (°)	110.320, 110.320, 110.320, 90.00, 90.00, 90.00
R / Rfree (%)	18.6 / 21

The structure of Nano-Ring of Cadmium Ions Coordinated By NVPIZZA2-S16S58 also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Cadmium atom in the Nano-Ring of Cadmium Ions Coordinated By NVPIZZA2-S16S58 (pdb code 5f53). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Nano-Ring of Cadmium Ions Coordinated By NVPIZZA2-S16S58, PDB code: 5f53:

Cadmium binding site 1 out of 1 in the Nano-Ring of Cadmium Ions Coordinated By NVPIZZA2-S16S58


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Nano-Ring of Cadmium Ions Coordinated By NVPIZZA2-S16S58 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd101 b:16.1 occ:1.00 NE2 A:HIS31 2.3 21.7 1.0 O A:HOH244 2.4 22.9 1.0 CL A:CL102 2.5 18.0 0.5 CL A:CL103 2.7 16.9 0.5 CE1 A:HIS31 3.3 21.1 1.0 CD2 A:HIS31 3.3 20.1 1.0 O A:HOH242 4.2 21.8 1.0 ND1 A:HIS31 4.4 19.4 1.0 CG A:HIS31 4.5 19.2 1.0 O A:HOH250 4.9 42.5 1.0

A.R.D.Voet, D.Terada, H.Noguchi, C.Addy, S.Unzai, S.Akashi, K.Y.J.Zhang, J.R.H.Tame. A Cadmium Chloride Ring Created By A Designed Symmetrical Protein To Be Published.