Cadmium in PDB 5i0c: Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N- Acyltransferase Domain From Escherichia Coli Str. K-12

The structure of Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N- Acyltransferase Domain From Escherichia Coli Str. K-12, PDB code: 5i0c was solved by E.V.Filippova, G.Minasov, Z.Wawrzak, L.Shuvalova, I.Dubrovska, J.Winsor, S.Grimshaw, A.J.Wolfe, W.F.Anderson, Center For Structural Genomics Ofinfectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.19 / 1.92
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	53.690, 87.840, 41.580, 90.00, 90.00, 90.00
R / Rfree (%)	21.6 / 26.6

The structure of Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N- Acyltransferase Domain From Escherichia Coli Str. K-12 also contains other interesting chemical elements:

Nickel

(Ni)

3 atoms

The binding sites of Cadmium atom in the Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N- Acyltransferase Domain From Escherichia Coli Str. K-12 (pdb code 5i0c). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N- Acyltransferase Domain From Escherichia Coli Str. K-12, PDB code: 5i0c:

Cadmium binding site 1 out of 1 in the Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N- Acyltransferase Domain From Escherichia Coli Str. K-12


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N- Acyltransferase Domain From Escherichia Coli Str. K-12 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd104 b:39.6 occ:1.00 OE1 A:GLU36 2.0 36.3 1.0 O A:HOH221 2.2 40.6 1.0 O A:HOH252 2.6 35.0 1.0 CD A:GLU36 2.7 35.9 1.0 OE2 A:GLU36 2.7 36.0 1.0 CG A:GLU36 4.1 34.3 1.0 CG1 A:VAL24 4.8 28.7 1.0 CG2 A:VAL26 5.0 51.5 1.0

E.V.Filippova, G.Minasov, Z.Wawrzak, L.Shuvalova, I.Dubrovska, J.Winsor, S.Grimshaw, A.J.Wolfe, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Predicted Acyltransferase Yjdj with Acyl-Coa N-Acyltransferase Domain From Escherichia Coli Str. K-12 To Be Published.