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Cadmium in PDB 5i87: Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase

Enzymatic activity of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase

All present enzymatic activity of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase:
6.4.1.2;

Protein crystallography data

The structure of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase, PDB code: 5i87 was solved by E.Stuttfeld, M.Hunkeler, A.Hagmann, S.Imseng, T.Maier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 84.52 / 3.70
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 267.270, 267.270, 210.610, 90.00, 90.00, 90.00
R / Rfree (%) 34.7 / 38.1

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase (pdb code 5i87). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 5 binding sites of Cadmium where determined in the Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase, PDB code: 5i87:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5;

Cadmium binding site 1 out of 5 in 5i87

Go back to Cadmium Binding Sites List in 5i87
Cadmium binding site 1 out of 5 in the Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd901

b:0.5
occ:1.00
CB A:UNK214 4.9 0.2 1.0

Cadmium binding site 2 out of 5 in 5i87

Go back to Cadmium Binding Sites List in 5i87
Cadmium binding site 2 out of 5 in the Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase within 5.0Å range:

Cadmium binding site 3 out of 5 in 5i87

Go back to Cadmium Binding Sites List in 5i87
Cadmium binding site 3 out of 5 in the Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cd901

b:0.3
occ:1.00
CB B:UNK86 4.3 0.2 1.0
O A:UNK85 4.4 0.9 1.0
O B:UNK85 4.6 0.1 1.0
CA B:UNK86 4.7 0.1 1.0

Cadmium binding site 4 out of 5 in 5i87

Go back to Cadmium Binding Sites List in 5i87
Cadmium binding site 4 out of 5 in the Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase within 5.0Å range:

Cadmium binding site 5 out of 5 in 5i87

Go back to Cadmium Binding Sites List in 5i87
Cadmium binding site 5 out of 5 in the Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 5 of Crystal Structure of Bt-Cd Domains of Human Acetyl-Coa Carboxylase within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cd903

b:0.1
occ:1.00
CB B:UNK417 4.3 0.7 1.0

Reference:

M.Hunkeler, E.Stuttfeld, A.Hagmann, S.Imseng, T.Maier. The Dynamic Organization of Fungal Acetyl-Coa Carboxylase. Nat Commun V. 7 11196 2016.
ISSN: ESSN 2041-1723
PubMed: 27073141
DOI: 10.1038/NCOMMS11196
Page generated: Sat Dec 12 08:26:51 2020

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