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Cadmium in PDB 7any: Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate
Protein crystallography data
The structure of Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate, PDB code: 7any
was solved by
M.R.Zeronian,
N.M.Pearce,
M.Lutz,
T.M.Wood,
N.I.Martin,
B.J.C.Janssen,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 34.76 / 1.14 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 40.132, 68.321, 40.132, 90, 120, 90 |
| R / Rfree (%) | 16 / 19.2 |
Other elements in 7any:
The structure of Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate also contains other interesting chemical elements:
| Chlorine | (Cl) | 14 atoms |
| Calcium | (Ca) | 42 atoms |
| Sodium | (Na) | 1 atom |
Cadmium Binding Sites:
The binding sites of Cadmium atom in the Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate
(pdb code 7any). This binding sites where shown within
5.0 Angstroms radius around Cadmium atom.
In total 3 binding sites of Cadmium where determined in the Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate, PDB code: 7any:
Jump to Cadmium binding site number: 1; 2; 3;
In total 3 binding sites of Cadmium where determined in the Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate, PDB code: 7any:
Jump to Cadmium binding site number: 1; 2; 3;
Cadmium binding site 1 out of 3 in 7any
Go back to
Cadmium Binding Sites List in 7any
Cadmium binding site 1 out
of 3 in the Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 1 of Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate within 5.0Å range:
|
Cadmium binding site 2 out of 3 in 7any
Go back to
Cadmium Binding Sites List in 7any
Cadmium binding site 2 out
of 3 in the Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 2 of Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate within 5.0Å range:
|
Cadmium binding site 3 out of 3 in 7any
Go back to
Cadmium Binding Sites List in 7any
Cadmium binding site 3 out
of 3 in the Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 3 of Structure of the Laspartomycin C Friulimicin-Like Mutant in Complex with Geranyl Phosphate within 5.0Å range:
|
Reference:
T.M.Wood,
M.R.Zeronian,
N.Buijs,
K.Bertheussen,
H.K.Abedian,
A.V.Johnson,
N.M.Pearce,
M.Lutz,
J.Kemmink,
T.Seirsma,
L.W.Hamoen,
B.J.C.Janssen,
N.I.Martin.
Mechanistic Insights Into the C55-P Targeting Lipopeptide Antibiotics Revealed By Structure-Activity Studies and High-Resolution Crystal Structures Chem Sci V. 13 2985 2022.
ISSN: ESSN 2041-6539
DOI: 10.1039/D1SC07190D
Page generated: Fri Jul 19 19:50:27 2024
ISSN: ESSN 2041-6539
DOI: 10.1039/D1SC07190D
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