Cadmium in PDB 7sis: Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01

The structure of Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01, PDB code: 7sis was solved by C.Szeto, S.Gras, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	45.66 / 1.90
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	60.336, 80.753, 110.709, 90, 90, 90
R / Rfree (%)	17.1 / 20.6

The structure of Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01 also contains other interesting chemical elements:

Zinc

(Zn)

1 atom

The binding sites of Cadmium atom in the Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01 (pdb code 7sis). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01, PDB code: 7sis:

Cadmium binding site 1 out of 1 in the Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd402 b:77.5 occ:1.00 NE2 A:HIS197 2.5 52.9 1.0 OE2 A:GLU198 2.8 74.8 1.0 CD2 A:HIS197 3.3 52.6 1.0 CD A:GLU198 3.4 76.5 1.0 CE1 A:HIS197 3.5 52.4 1.0 OE1 A:GLU198 3.8 81.2 1.0 CG A:GLU198 4.4 49.5 1.0 CG A:HIS197 4.5 49.6 1.0 ND1 A:HIS197 4.6 52.3 1.0 O A:HOH711 4.7 69.0 1.0

C.Szeto, S.Gras. Sars-Cov-2 Spike-Derived Peptide S976-984 (Vlndilsrl) Presented By Hla-A*02:01 To Be Published.