Cadmium in PDB 8fu4: Hcmv US11 Peptide Binding to Hla-A*02:01

The structure of Hcmv US11 Peptide Binding to Hla-A*02:01, PDB code: 8fu4 was solved by G.M.Watson, R.Berry, D.R.Littler, J.Rossjohn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.64 / 1.60
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	59.874, 79.27, 110.664, 90, 90, 90
R / Rfree (%)	18.1 / 20.4

The binding sites of Cadmium atom in the Hcmv US11 Peptide Binding to Hla-A*02:01 (pdb code 8fu4). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Hcmv US11 Peptide Binding to Hla-A*02:01, PDB code: 8fu4:

Cadmium binding site 1 out of 1 in the Hcmv US11 Peptide Binding to Hla-A*02:01


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Hcmv US11 Peptide Binding to Hla-A*02:01 within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd302 b:23.6 occ:1.00 OE1 A:GLU154 2.5 22.1 1.0 OE2 A:GLU154 2.5 24.2 1.0 ND1 A:HIS151 2.6 30.8 1.0 CD A:GLU154 2.8 22.6 1.0 CE1 A:HIS151 3.3 29.2 1.0 CG A:HIS151 3.4 29.0 1.0 CB A:HIS151 3.8 27.7 1.0 O A:HOH699 4.1 40.8 1.0 NE2 A:HIS151 4.3 34.7 1.0 CG A:GLU154 4.3 22.9 1.0 CD2 A:HIS151 4.4 30.5 1.0 O A:HOH508 4.7 35.1 1.0 CA A:HIS151 4.8 28.5 1.0 O A:HOH443 4.8 37.8 1.0

C.Zimmermann, G.M.Watson, L.Bauersfeld, R.Berry, B.Ciblis, H.Lan, C.Gerke, V.Oberhardt, J.Fuchs, M.Hofmann, C.Freund, J.Rossjohn, F.Momburg, H.Hengel, A.Halenius. Diverse Cytomegalovirus US11 Antagonism and Mhc-A Evasion Strategies Reveal A Tit-For-Tat Coevolutionary Arms Race in Hominids. Proc.Natl.Acad.Sci.Usa V. 121 85121 2024.
ISSN: ESSN 1091-6490
PubMed: 38377192
DOI: 10.1073/PNAS.2315985121