Cadmium in PDB 8i77: Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius.

The structure of Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius., PDB code: 8i77 was solved by B.Maity, J.Tian, S.Abe, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.72 / 1.50
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	181.749, 181.749, 181.749, 90, 90, 90
R / Rfree (%)	16 / 17.7

The structure of Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Cadmium atom in the Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. (pdb code 8i77). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 5 binding sites of Cadmium where determined in the Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius., PDB code: 8i77:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5;

Cadmium binding site 1 out of 5 in the Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd201 b:28.8 occ:0.10 CD A:CD203 2.4 28.2 0.2 OE2 A:GLU130 3.2 14.6 1.0 O A:HOH420 3.6 40.5 1.0 OE1 A:GLU130 3.8 18.0 1.0 O A:HOH527 3.9 31.4 1.0 CD A:GLU130 3.9 14.5 1.0 NE2 A:HIS114 4.8 9.3 1.0 CE1 A:HIS114 4.9 9.6 1.0 CB A:CYS126 5.0 10.4 1.0

Cadmium binding site 2 out of 5 in the Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd202 b:25.0 occ:0.10 OD1 A:ASP127 2.5 12.0 0.5 O A:HOH330 2.5 30.4 1.0 CD A:CD205 3.1 51.0 0.1 OD1 A:ASP127 3.3 15.7 0.5 CG A:ASP127 3.7 11.8 0.5 OG A:SER131 4.1 18.8 1.0 OE1 A:GLU130 4.2 18.0 1.0 OD2 A:ASP127 4.3 13.3 0.5 CG A:ASP127 4.5 12.1 0.5 CD A:CD203 4.7 28.2 0.2 CB A:ASP127 4.9 11.1 0.5

Cadmium binding site 3 out of 5 in the Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd203 b:28.2 occ:0.17 OE1 A:GLU130 2.4 18.0 1.0 CD A:CD201 2.4 28.8 0.1 CD A:GLU130 3.1 14.5 1.0 OE2 A:GLU130 3.1 14.6 1.0 OD1 A:ASP127 4.0 12.0 0.5 CB A:ASP127 4.1 11.1 0.5 CA A:ASP127 4.3 10.6 0.5 CA A:ASP127 4.3 10.6 0.5 N A:ASP127 4.5 9.7 1.0 CG A:ASP127 4.5 11.8 0.5 CG A:GLU130 4.5 13.2 1.0 CB A:ASP127 4.7 11.4 0.5 CD A:CD202 4.7 25.0 0.1 C A:CYS126 4.8 9.3 1.0 CB A:CYS126 5.0 10.4 1.0 OD1 A:ASP127 5.0 15.7 0.5 CB A:GLU130 5.0 12.7 1.0

Cadmium binding site 4 out of 5 in the Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd204 b:8.7 occ:0.50 OD1 A:ASP80 2.3 8.2 1.0 OD2 A:ASP80 2.4 11.0 1.0 CL A:CL210 2.4 12.6 1.0 CG A:ASP80 2.7 9.5 1.0 CB A:ASP80 4.2 8.6 1.0 O A:HOH397 4.3 11.9 1.0 O A:HOH332 4.7 15.7 1.0

Cadmium binding site 5 out of 5 in the Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 5 of Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd205 b:51.0 occ:0.10 O A:HOH330 2.4 30.4 1.0 CD A:CD202 3.1 25.0 0.1 OG A:SER131 3.9 18.8 1.0 OD1 A:ASP127 4.5 12.0 0.5 OD1 A:ASP127 4.6 15.7 0.5 CB A:SER131 4.9 15.8 1.0

B.Maity, J.Tian, S.Abe, T.Ueno. Crystal Structure of Horse Spleen L-Ferritin A115V Mutant at -180DEG Celsius. To Be Published.