Cadmium in PDB 8i81: Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.

The structure of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius., PDB code: 8i81 was solved by B.Maity, J.Tian, S.Abe, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.71 / 1.50
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	181.653, 181.653, 181.653, 90, 90, 90
R / Rfree (%)	15.2 / 16.8

The structure of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Cadmium atom in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. (pdb code 8i81). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 7 binding sites of Cadmium where determined in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius., PDB code: 8i81:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5; 6; 7;

Cadmium binding site 1 out of 7 in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd201 b:18.7 occ:0.10 CD A:CD203 1.5 16.5 0.2 OE1 A:GLU130 2.4 22.7 1.0 CD A:GLU130 3.3 19.0 1.0 OE2 A:GLU130 3.6 16.6 1.0 OD1 A:ASP127 3.8 15.5 0.5 O A:HOH318 4.3 26.4 1.0 CD A:CD202 4.4 38.5 0.1 CG A:ASP127 4.7 13.1 0.5 CG A:GLU130 4.7 14.6 1.0 CB A:ASP127 4.7 11.3 0.5

Cadmium binding site 2 out of 7 in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd202 b:38.5 occ:0.10 O A:HOH326 2.2 34.9 1.0 OD1 A:ASP127 2.7 15.5 0.5 OD1 A:ASP127 3.6 13.2 0.5 CG A:ASP127 3.7 13.1 0.5 OG A:SER131 4.1 23.5 1.0 OD2 A:ASP127 4.1 15.2 0.5 OE1 A:GLU130 4.4 22.7 1.0 CD A:CD201 4.4 18.7 0.1 CG A:ASP127 4.8 9.8 0.5

Cadmium binding site 3 out of 7 in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd203 b:16.5 occ:0.20 CD A:CD201 1.5 18.7 0.1 OE1 A:GLU130 2.6 22.7 1.0 O A:HOH318 2.9 26.4 1.0 OE2 A:GLU130 2.9 16.6 1.0 CD A:GLU130 3.0 19.0 1.0 CG A:GLU130 4.3 14.6 1.0 O A:HOH528 4.6 29.1 1.0

Cadmium binding site 4 out of 7 in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd204 b:38.1 occ:0.20 O A:HOH412 2.2 32.5 1.0 NE2 A:HIS49 2.3 11.3 0.5 CE1 A:HIS49 2.9 10.6 0.5 OD2 A:ASP174 3.6 68.2 1.0 CD2 A:HIS49 3.6 11.1 0.5 CD A:GLU45 3.8 23.6 1.0 OE1 A:GLU45 3.8 31.9 1.0 CG A:GLU45 3.8 15.2 1.0 ND1 A:HIS49 4.2 12.1 0.5 O1 A:EDO213 4.2 27.7 1.0 O A:HOH313 4.3 37.2 1.0 O A:HOH349 4.3 21.0 1.0 OE2 A:GLU45 4.4 22.7 1.0 CG A:ASP174 4.5 61.0 1.0 CG A:HIS49 4.5 10.3 0.5 O A:HOH309 4.6 40.3 1.0 O A:HOH329 4.7 42.8 1.0 OD1 A:ASP174 4.8 63.9 1.0 O2 A:EDO213 5.0 35.3 1.0

Cadmium binding site 5 out of 7 in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 5 of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd205 b:34.9 occ:0.20 OE2 A:GLU56 2.1 40.2 1.0 OE2 A:GLU60 2.2 27.6 1.0 CD A:GLU60 2.9 24.4 1.0 OE1 A:GLU60 3.0 25.0 1.0 CD A:GLU56 3.2 30.4 1.0 CG A:GLU56 3.6 17.7 1.0 OE1 A:GLU56 4.3 35.8 1.0 CG A:GLU60 4.4 16.4 1.0 CB A:GLU56 4.9 12.3 1.0

Cadmium binding site 6 out of 7 in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 6 of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd206 b:18.7 occ:0.20 O A:HOH347 1.9 35.4 1.0 NE2 A:HIS132 2.2 21.1 1.0 CE1 A:HIS132 2.9 21.1 1.0 CD2 A:HIS132 3.3 19.7 1.0 O A:HOH478 3.7 26.3 1.0 O A:HOH418 3.9 33.6 1.0 ND1 A:HIS132 4.1 19.4 1.0 CG A:HIS132 4.3 16.2 1.0 NH2 A:ARG64 4.3 32.6 1.0

Cadmium binding site 7 out of 7 in the Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 7 of Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd207 b:11.0 occ:0.50 OD2 A:ASP80 2.3 13.1 1.0 OD1 A:ASP80 2.3 8.1 1.0 CL A:CL215 2.5 21.5 1.0 CG A:ASP80 2.7 11.5 1.0 CB A:ASP80 4.2 10.5 1.0 O A:HOH392 4.4 13.6 1.0 O A:HOH352 4.7 16.5 1.0

B.Maity, J.Tian, S.Abe, T.Ueno. Crystal Structure of Horse Spleen L-Ferritin A115G Mutant at -180DEG Celsius. To Be Published.