Cadmium in PDB 8i8u: Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius.

The structure of Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius., PDB code: 8i8u was solved by B.Maity, J.Tian, S.Abe, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	18.51 / 1.60
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	181.296, 181.296, 181.296, 90, 90, 90
R / Rfree (%)	17.1 / 20.3

The structure of Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius. also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Cadmium atom in the Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius. (pdb code 8i8u). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 4 binding sites of Cadmium where determined in the Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius., PDB code: 8i8u:
Jump to Cadmium binding site number: 1; 2; 3; 4;

Cadmium binding site 1 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd207 b:45.8 occ:0.20 OD1 X:ASP127 2.4 14.7 0.5 O X:HOH346 2.9 38.9 1.0 OD1 X:ASP127 3.5 13.2 0.5 CG X:ASP127 3.6 14.1 0.5 CD X:CD208 3.7 27.0 0.1 OE1 X:GLU130 3.9 23.1 1.0 OD2 X:ASP127 4.2 14.7 0.5 OG X:SER131 4.2 25.2 1.0 CG X:ASP127 4.7 11.4 0.5 CB X:ASP127 4.8 12.9 0.5 CB X:GLU130 4.8 15.3 1.0

Cadmium binding site 2 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd208 b:27.0 occ:0.15 O X:HOH332 1.8 17.9 1.0 OE1 X:GLU130 2.3 23.1 1.0 CD X:GLU130 3.3 19.2 1.0 OE2 X:GLU130 3.5 16.8 1.0 CD X:CD207 3.7 45.8 0.2 OD1 X:ASP127 3.8 14.7 0.5 CG X:GLU130 4.6 15.8 1.0 CG X:ASP127 4.7 14.1 0.5 CB X:ASP127 4.8 12.9 0.5 CB X:GLU130 4.9 15.3 1.0

Cadmium binding site 3 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd209 b:19.3 occ:0.50 OD2 X:ASP80 1.7 8.2 1.0 OD1 X:ASP80 2.4 12.3 1.0 CG X:ASP80 2.5 13.7 1.0 CL X:CL211 2.5 43.8 1.0 CB X:ASP80 4.0 14.8 1.0 O X:HOH334 4.5 20.4 1.0 O X:HOH442 4.5 22.6 1.0

Cadmium binding site 4 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd210 b:26.0 occ:0.20 NE2 X:HIS132 2.2 24.5 1.0 CE1 X:HIS132 2.9 27.1 1.0 CD2 X:HIS132 3.4 25.6 1.0 O X:HOH452 3.5 40.3 1.0 O X:HOH470 3.7 34.2 1.0 O X:HOH455 4.0 39.6 1.0 ND1 X:HIS132 4.1 23.8 1.0 O X:HOH427 4.3 38.9 1.0 CG X:HIS132 4.4 21.9 1.0 NH1 X:ARG64 4.6 37.0 1.0

B.Maity, J.Tian, S.Abe, T.Ueno. Crystal Structure of Horse Spleen L-Ferritin S118A Mutant at -180DEG Celsius. To Be Published.