Cadmium in PDB 8j0w: Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius.

The structure of Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius., PDB code: 8j0w was solved by B.Maity, J.Tian, S.Abe, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.25 / 1.60
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	181.999, 181.999, 181.999, 90, 90, 90
R / Rfree (%)	14.5 / 17.5

The structure of Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius. also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Cadmium atom in the Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius. (pdb code 8j0w). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 3 binding sites of Cadmium where determined in the Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius., PDB code: 8j0w:
Jump to Cadmium binding site number: 1; 2; 3;

Cadmium binding site 1 out of 3 in the Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd204 b:11.2 occ:0.50 OD1 X:ASP80 2.4 8.3 1.0 OD2 X:ASP80 2.4 12.3 1.0 CL X:CL207 2.5 18.7 1.0 CG X:ASP80 2.7 10.7 1.0 CB X:ASP80 4.2 10.0 1.0 O X:HOH351 4.3 14.4 1.0 O X:HOH334 4.6 21.7 1.0

Cadmium binding site 2 out of 3 in the Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd205 b:30.6 occ:0.15 O X:HOH330 1.8 22.4 1.0 OE1 X:GLU130 2.4 21.3 1.0 CD X:GLU130 3.3 17.4 1.0 CD X:CD206 3.4 84.6 0.2 OE2 X:GLU130 3.5 16.3 1.0 OD1 X:ASP127 4.2 14.6 0.5 CG X:GLU130 4.7 14.2 1.0 CB X:ASP127 4.9 12.9 0.5 CG X:ASP127 5.0 14.8 0.5

Cadmium binding site 3 out of 3 in the Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd206 b:84.6 occ:0.19 OD1 X:ASP127 2.5 14.6 0.5 O X:HOH327 3.0 33.7 1.0 CD X:CD205 3.4 30.6 0.1 OD1 X:ASP127 3.5 14.0 0.5 OE1 X:GLU130 3.6 21.3 1.0 CG X:ASP127 3.7 14.8 0.5 OD2 X:ASP127 4.5 16.8 0.5 OG X:SER131 4.5 26.1 1.0 CG X:ASP127 4.6 12.1 0.5 CB X:ASP127 4.7 12.9 0.5 O X:HOH330 4.7 22.4 1.0 CB X:GLU130 4.8 14.1 1.0 CD X:GLU130 4.8 17.4 1.0

B.Maity, J.Tian, S.Abe, T.Ueno. Crystal Structure of Horse Spleen L-Ferritin at -40DEG Celsius. To Be Published.