Cadmium in PDB 8j0x: Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius.

The structure of Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius., PDB code: 8j0x was solved by B.Maity, J.Tian, S.Abe, T.Ueno, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.29 / 1.60
Space group	F 4 3 2
Cell size a, b, c (Å), α, β, γ (°)	182.34, 182.34, 182.34, 90, 90, 90
R / Rfree (%)	14.8 / 16.9

The structure of Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius. also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Cadmium atom in the Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius. (pdb code 8j0x). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total 4 binding sites of Cadmium where determined in the Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius., PDB code: 8j0x:
Jump to Cadmium binding site number: 1; 2; 3; 4;

Cadmium binding site 1 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd201 b:20.4 occ:0.25 CD X:CD204 0.9 5.3 0.2 OD2 X:ASP80 1.9 17.8 1.0 OD1 X:ASP80 2.3 10.3 1.0 CG X:ASP80 2.4 13.3 1.0 CL X:CL205 2.9 33.6 1.0 O X:HOH307 3.8 23.8 1.0 CB X:ASP80 3.9 11.7 1.0 O X:HOH335 4.4 18.3 1.0 CA X:ASP80 4.9 11.1 1.0

Cadmium binding site 2 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 2 of Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd202 b:36.6 occ:0.18 O X:HOH352 1.9 31.2 1.0 OE1 X:GLU130 2.5 22.5 1.0 CD X:GLU130 3.4 18.1 1.0 OE2 X:GLU130 3.6 16.6 1.0 CD X:CD203 4.4 32.2 0.1 OD1 X:ASP127 4.6 28.2 1.0 CG X:GLU130 4.7 15.1 1.0

Cadmium binding site 3 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 3 of Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd203 b:32.2 occ:0.10 O X:HOH343 2.4 32.4 1.0 OD1 X:ASP127 2.9 28.2 1.0 OG X:SER131 4.1 28.1 1.0 CG X:ASP127 4.2 19.4 1.0 OE1 X:GLU130 4.3 22.5 1.0 CD X:CD202 4.4 36.6 0.2 OD2 X:ASP127 4.9 23.9 1.0

Cadmium binding site 4 out of 4 in the Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 4 of Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius. within 5.0Å range: probe atom residue distance (Å) B Occ X:Cd204 b:5.3 occ:0.25 CD X:CD201 0.9 20.4 0.2 CL X:CL205 2.4 33.6 1.0 OD1 X:ASP80 2.5 10.3 1.0 OD2 X:ASP80 2.6 17.8 1.0 CG X:ASP80 2.9 13.3 1.0 O X:HOH335 4.4 18.3 1.0 CB X:ASP80 4.4 11.7 1.0 O X:HOH307 4.5 23.8 1.0

B.Maity, J.Tian, S.Abe, T.Ueno. Crystal Structure of Horse Spleen L-Ferritin at -20DEG Celsius. To Be Published.