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Cadmium in PDB 8kh2: Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Protein crystallography data
The structure of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42)., PDB code: 8kh2
was solved by
B.Maity,
J.Tian,
S.Abe,
T.Ueno,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 21.69 / 2.00 |
| Space group | F 4 3 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 181.935, 181.935, 181.935, 90, 90, 90 |
| R / Rfree (%) | 21.5 / 25.8 |
Other elements in 8kh2:
The structure of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). also contains other interesting chemical elements:
| Chlorine | (Cl) | 1 atom |
Cadmium Binding Sites:
The binding sites of Cadmium atom in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
(pdb code 8kh2). This binding sites where shown within
5.0 Angstroms radius around Cadmium atom.
In total 9 binding sites of Cadmium where determined in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42)., PDB code: 8kh2:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;
In total 9 binding sites of Cadmium where determined in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42)., PDB code: 8kh2:
Jump to Cadmium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9;
Cadmium binding site 1 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 1 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 1 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 2 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 2 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 2 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 3 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 3 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 3 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 4 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 4 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 4 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 5 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 5 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 5 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 6 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 6 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 6 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 7 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 7 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 7 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 8 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 8 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 8 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Cadmium binding site 9 out of 9 in 8kh2
Go back to
Cadmium Binding Sites List in 8kh2
Cadmium binding site 9 out
of 9 in the Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42).
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Cadmium with other atoms in the Cd binding
site number 9 of Crystal Structure of Horse-Spleen L-Ferritin Fused with Amyloid Beta Peptide (1-42). within 5.0Å range:
|
Reference:
B.Maity,
S.Kameyama,
J.Tian,
T.T.Pham,
S.Abe,
E.Chatani,
K.Murata,
T.Ueno.
Fusion of Amyloid Beta with Ferritin Yields An Isolated Oligomeric Beta-Sheet-Rich Aggregate Inside the Ferritin Cage. Biomater Sci 2024.
ISSN: ISSN 2047-4849
PubMed: 38511491
DOI: 10.1039/D4BM00173G
Page generated: Fri Jul 19 20:34:59 2024
ISSN: ISSN 2047-4849
PubMed: 38511491
DOI: 10.1039/D4BM00173G
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