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Cadmium in PDB 8ue9: Structure of Trek-1CG*:CAT335

Protein crystallography data

The structure of Structure of Trek-1CG*:CAT335, PDB code: 8ue9 was solved by A.Mondal, H.Lee, D.L.Minor, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.62 / 3.00
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 67.069, 119.776, 129.708, 90, 90, 90
R / Rfree (%) 26.8 / 30.6

Other elements in 8ue9:

The structure of Structure of Trek-1CG*:CAT335 also contains other interesting chemical elements:

Chlorine (Cl) 4 atoms
Potassium (K) 5 atoms

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Structure of Trek-1CG*:CAT335 (pdb code 8ue9). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Structure of Trek-1CG*:CAT335, PDB code: 8ue9:

Cadmium binding site 1 out of 1 in 8ue9

Go back to Cadmium Binding Sites List in 8ue9
Cadmium binding site 1 out of 1 in the Structure of Trek-1CG*:CAT335


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Structure of Trek-1CG*:CAT335 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cd407

b:338.3
occ:1.00
OD2 B:ASP263 2.9 247.7 1.0
OD1 B:ASP263 3.1 239.1 1.0
CE1 B:HIS126 3.1 200.7 1.0
CG B:ASP263 3.4 238.0 1.0
CD1 B:ILE115 3.9 251.5 1.0
ND1 B:HIS126 3.9 177.8 1.0
NE2 B:HIS126 4.1 202.2 1.0
CG1 B:VAL124 4.4 197.3 1.0
CB B:ASP263 4.8 206.3 1.0
CG1 B:ILE115 4.9 257.6 1.0

Reference:

A.Mondal, H.Lee, D.L.Minor. Structure of Trek-1(S131C Mutant) with ML335 To Be Published.
Page generated: Fri Jul 19 20:42:33 2024

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