Cadmium in PDB 5k2f: Structure of Nnqqny From Yeast Prion SUP35 with Cadmium Acetate Determined By Microed

The binding sites of Cadmium atom in the Structure of Nnqqny From Yeast Prion SUP35 with Cadmium Acetate Determined By Microed (pdb code 5k2f). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Structure of Nnqqny From Yeast Prion SUP35 with Cadmium Acetate Determined By Microed, PDB code: 5k2f:

Cadmium binding site 1 out of 1 in the Structure of Nnqqny From Yeast Prion SUP35 with Cadmium Acetate Determined By Microed


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Structure of Nnqqny From Yeast Prion SUP35 with Cadmium Acetate Determined By Microed within 5.0Å range: probe atom residue distance (Å) B Occ A:Cd101 b:11.3 occ:1.00 OXT A:ACT102 2.2 15.8 1.0 O A:TYR6 2.5 6.7 1.0 OXT A:TYR6 2.5 7.6 1.0 O A:HOH201 2.6 21.8 1.0 C A:TYR6 2.9 6.4 1.0 C A:ACT102 3.0 17.1 1.0 O A:ACT102 3.0 14.5 1.0 O A:HOH202 4.2 8.3 1.0 CH3 A:ACT102 4.4 18.1 1.0 O A:HOH207 4.4 22.9 1.0 CA A:TYR6 4.4 5.9 1.0 H2 A:ACT102 4.6 18.2 1.0 O A:HOH205 4.7 16.4 1.0 HA A:TYR6 4.7 5.9 1.0 H1 A:ACT102 4.9 18.0 1.0

M.R.Sawaya, J.Rodriguez, D.Cascio, M.J.Collazo, D.Shi, F.E.Reyes, J.Hattne, T.Gonen, D.S.Eisenberg. Ab Initio Structure Determination From Prion Nanocrystals at Atomic Resolution By Microed. Proc.Natl.Acad.Sci.Usa V. 113 11232 2016.
ISSN: ESSN 1091-6490
PubMed: 27647903
DOI: 10.1073/PNAS.1606287113