Cadmium in PDB 5sbj: The Crystal Structure of Metp in Complex with Cd at A Resolution of 1.29 A.

The structure of The Crystal Structure of Metp in Complex with Cd at A Resolution of 1.29 A., PDB code: 5sbj was solved by L.Di Costanzo, S.La Gatta, V.Pavone, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	31.02 / 1.28
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	37.07, 56.654, 19.331, 90, 90, 90
R / Rfree (%)	15.1 / 17

The binding sites of Cadmium atom in the The Crystal Structure of Metp in Complex with Cd at A Resolution of 1.29 A. (pdb code 5sbj). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the The Crystal Structure of Metp in Complex with Cd at A Resolution of 1.29 A., PDB code: 5sbj:

Cadmium binding site 1 out of 1 in the The Crystal Structure of Metp in Complex with Cd at A Resolution of 1.29 A.


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of The Crystal Structure of Metp in Complex with Cd at A Resolution of 1.29 A. within 5.0Å range: probe atom residue distance (Å) B Occ C:Cd101 b:10.7 occ:1.00 SG C:CYS2 2.5 10.8 1.0 SG C:CYS5 2.5 11.2 1.0 SG C:CYS20 2.5 9.8 1.0 SG C:CYS17 2.6 9.8 1.0 H C:CYS20 3.2 11.3 1.0 HB3 C:CYS2 3.2 12.1 1.0 HB3 C:CYS17 3.2 9.8 1.0 HB3 C:CYS5 3.2 15.2 1.0 HB3 C:CYS20 3.2 13.5 1.0 CB C:CYS2 3.3 10.0 1.0 CB C:CYS17 3.3 8.2 1.0 H C:CYS5 3.4 11.5 1.0 HB2 C:CYS17 3.4 9.8 1.0 HB2 C:CYS2 3.4 12.1 1.0 CB C:CYS5 3.4 12.6 1.0 CB C:CYS20 3.5 11.2 1.0 HB3 C:ASN19 3.7 14.5 1.0 N C:CYS5 3.8 9.6 1.0 HB2 C:ASP4 3.8 15.5 1.0 N C:CYS20 3.9 9.5 1.0 HB3 C:ALA22 3.9 14.5 1.0 HB3 C:ALA7 3.9 16.8 1.0 H C:ALA22 4.1 11.1 1.0 HB2 C:ALA22 4.1 14.5 1.0 HD22 C:ASN19 4.2 14.9 1.0 H C:ALA7 4.2 13.8 1.0 CA C:CYS5 4.2 10.3 1.0 CA C:CYS20 4.2 9.4 1.0 HB2 C:CYS5 4.3 15.2 1.0 HB2 C:CYS20 4.3 13.5 1.0 HB2 C:ALA7 4.3 16.8 1.0 CB C:ALA22 4.5 12.1 1.0 HB3 C:ASP4 4.5 15.5 1.0 H C:ASP4 4.5 11.9 1.0 CB C:ASP4 4.5 12.9 1.0 CB C:ALA7 4.5 14.0 1.0 H C:GLY6 4.6 12.4 1.0 H C:ASN19 4.6 12.3 1.0 C C:ASP4 4.7 10.8 1.0 CB C:ASN19 4.7 12.1 1.0 CA C:CYS2 4.7 11.1 1.0 H C:GLY21 4.8 11.3 1.0 CA C:CYS17 4.8 8.6 1.0 C C:CYS5 4.9 13.6 1.0 C C:CYS20 4.9 9.9 1.0 ND2 C:ASN19 4.9 12.4 1.0 N C:ALA22 4.9 9.3 1.0 N C:GLY6 5.0 10.3 1.0 N C:ALA7 5.0 11.5 1.0 C C:ASN19 5.0 10.6 1.0 HA C:CYS5 5.0 12.3 1.0

M.Chino, L.Di Costanzo. Miniaturization Process Reloaded - Structural and Functional Insights From A Miniaturized Rubredoxin To Be Published.