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Cadmium in PDB 5yti: Crystal Structure of Flagellar Hook Associated Protein-3 (Hap-3: Q5ZW61_LEGPH) From Legionella Pneumophila

Protein crystallography data

The structure of Crystal Structure of Flagellar Hook Associated Protein-3 (Hap-3: Q5ZW61_LEGPH) From Legionella Pneumophila, PDB code: 5yti was solved by S.Lankipalli, R.P.Hegde, D.Dey, S.C.Almo, U.A.Ramagopal, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 76.15 / 2.75
Space group P 42 21 2
Cell size a, b, c (Å), α, β, γ (°) 107.687, 107.687, 90.248, 90.00, 90.00, 90.00
R / Rfree (%) 23.5 / 28.8

Cadmium Binding Sites:

The binding sites of Cadmium atom in the Crystal Structure of Flagellar Hook Associated Protein-3 (Hap-3: Q5ZW61_LEGPH) From Legionella Pneumophila (pdb code 5yti). This binding sites where shown within 5.0 Angstroms radius around Cadmium atom.
In total only one binding site of Cadmium was determined in the Crystal Structure of Flagellar Hook Associated Protein-3 (Hap-3: Q5ZW61_LEGPH) From Legionella Pneumophila, PDB code: 5yti:

Cadmium binding site 1 out of 1 in 5yti

Go back to Cadmium Binding Sites List in 5yti
Cadmium binding site 1 out of 1 in the Crystal Structure of Flagellar Hook Associated Protein-3 (Hap-3: Q5ZW61_LEGPH) From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Cadmium with other atoms in the Cd binding site number 1 of Crystal Structure of Flagellar Hook Associated Protein-3 (Hap-3: Q5ZW61_LEGPH) From Legionella Pneumophila within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cd501

b:0.0
occ:1.00
OD2 A:ASP377 2.9 0.0 1.0
OD1 A:ASP377 3.6 0.6 1.0
CG A:ASP377 3.6 0.1 1.0
CD1 A:ILE49 4.5 0.2 1.0
O A:LEU373 4.7 0.3 1.0

Reference:

S.Lankipalli, U.A.Ramagopal. Crystal Structure of Hook Associated Protein-3 (Hap-3: Q5ZW61_LEGPH) From Legionella Pneumophila To Be Published.
Page generated: Thu Jul 10 14:45:39 2025

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